Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06653 ATGCAGAAAGAGTATAATGGCAGCAAGCCTAGTGTCACACAGATCGTGGTGGCCTCTTCCATTGGGTTGATAATTGCTGCAGCAATGCATTATCGCCTAAAAAAGTTTCGAGATCGAAAGATCATTCCGCGTTTGAGATATTCAAAGGCAGGCCAAACTCCAAAGCTTGAGAGATTCTCTCATTACGTAGCTAGACAAATGGGGTTCAAGGATAAAAGGAACTGTCCTAATTTATGTAAACTGGCTTCTGAATACATAAGAAAATCGGATGGATGTGAAGATGATATCTATGCTTTCTTCGAAAATGAACAAAATGCTGATTCACTTTTTGTTAAGCTTGTCGAGGAGTTTGAGAGATGTATTCTTAGTTACTTTGCATTCCATTGGAGCCTTGGTGATTTATTGATAAGTCAGGTCTTGAGCTCTGACACTGAGCCAAAAAAGAAGTTCAAACACATAGTTATGGCAGCAACTAGGGATCAAAGGGTTGAAAGGGTAACAAAGAATTTGAAAGTGGCTAGAGTTTTCAACACATTAGTAGAAGAGATGAGAGCAATGGGACTTGTATCGAATGATGACAACCGATGCACCGAGGTGATGGCTCCGGTGGCTCACAGTGATAGGAGTCCTGTCCTCCTTTTCATGGGTGGTGGTATGGGAGCTGGGAAGAGCACTGTTCTTAAAGACATTCTCAAAGAGCCTTTTTGGGTAGGAGCAGCTAGCAATGCTGTTATCATTGAGGCAGATGCATTCAAAGAATCAGATGTTATCTATAAGGCCCTTAGTTCAAGAGGTCATCATGACATGATTCGAATGGCTGAATTGGTACACCAATCATCAACGGATGCAGCCTCATCGCTCCTGGTAACGGCACTGAATGAAGGAAGAGATGTGATTATGGATGGAACATTCTCTTGGGTACCATTTGTTGTGCAAACAATAACAATGGCTAGGAATGTCCACCGTCGTCGTTACCGAATGGGAGCTGGTTACAAAGTGAATGATGATGGAACTACAACAGAGAACTATTGGGAAAGAATTGAAAATGAAGAACCTGAACAAATTGGTGGCAAAAAAAGGAAACCATATAGGTTAGAGCTTGTTGGAGTAGTATGTGATGCTTACCTTGCTGTTATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGGGCAGTAAGAGTGAAGTCACAATTGAAATCACACAAGAGATTTGCAGATGCATTTATGACTTATTGTCAACTAGTAGATAATGCAAGGCTATACAGCACAAATGCTTTAGAAGGCCCACCCAAATTGATAGGATGGAAAGACAGAGACAAGACATTGCTAGTTGATCCAGATGAAATTGATTGTTTGAAGAGAGTGGCTAGGTTGAATGAAGATGCTGATTCTATATATGAACTTTACAAGCACCCTAACCCAACATGTGAAGCAGGATCCATATGGAAAGACATTGTGTTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTTAAGTATTCAATTCAAAAGGTTGAGAGATTTTCACTCCAGAATGCTCCCTTAATGTTGGAGCAGTGA 1560 0.4096 MQKEYNGSKPSVTQIVVASSIGLIIAAAMHYRLKKFRDRKIIPRLRYSKAGQTPKLERFSHYVARQMGFKDKRNCPNLCKLASEYIRKSDGCEDDIYAFFENEQNADSLFVKLVEEFERCILSYFAFHWSLGDLLISQVLSSDTEPKKKFKHIVMAATRDQRVERVTKNLKVARVFNTLVEEMRAMGLVSNDDNRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWVGAASNAVIIEADAFKESDVIYKALSSRGHHDMIRMAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTITMARNVHRRRYRMGAGYKVNDDGTTTENYWERIENEEPEQIGGKKRKPYRLELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHKRFADAFMTYCQLVDNARLYSTNALEGPPKLIGWKDRDKTLLVDPDEIDCLKRVARLNEDADSIYELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKYSIQKVERFSLQNAPLMLEQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06653 519 Coils Coil 517 519 - -
Vivi1g06653 519 Gene3D - 193 429 IPR027417 -
Vivi1g06653 519 PANTHER UNCHARACTERIZED 5 512 IPR044802 -
Vivi1g06653 519 Pfam Zeta toxin 204 347 IPR010488 GO:0005524|GO:0016301
Vivi1g06653 519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06653 Vivi-Chr1 154261389 154264434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06653 - - aip:107634095 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06653 1 154261389 154264434 Vivi1g06653 1 154261389 154264434 ECH
Vivi6g03891 6 134901862 134905668 Vivi1g06653 1 154261389 154264434 PCT