Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03773 ATGGAGGAAGCGTTGGAACTCACACGCGCCAAAGACACCAAAGAAAGGATGGCCGGTGTGGAGCGTCTCTACCAACTTCTAGAAGCTTCTAGAAAGAGTCTCACCTCTTCTGAAGTTACTTCGCTCGTTGATTGCTGCATCGATCTTTTGAAGGATAACAACTTCCGTGTCTCTCAGGGCGCGCTTCAGTCTCTCGCCTCCGCGGTTGTTCTCTCCGGCGAGCATTTTAAGCTTCATTTTAACGCTCTTCTTCCGGCCGTTGTTGACCGTCTCGGTGATGCTAAACAGCCTGTCCGTGATGCTGCGCGGCGATTGCTTCTCACGCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCCTCAGCTTGGGCGCATAAAAGCTGGAGAGTCAGAGAGGAATTTACTAGAACTGTAACATCTGCAATAAATCTATTTTCATCTACCGAACTTCCACTTCAACGGGCTATCCTACCTCCTGTTTTGCAGTTGCTGAGTGACCCAAATCTTGCTGTTAGGGAAGCTGCTATTTTGTGCATTGAGGAAATGTATAAACAAGCTGGACCTCAATTTCGTGATGAGCTTCACCGCTACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTCGAGGGGATTCAACCAAATGTTCGCTCTTCAAATGGTATTCAAAGTGGTTATGTTAGTGGAGAAATTAAGCCTTTGAATCCCAAGAAAAGTAGTCCAAAGGCGAAAAGTTCTTCAAGGGAAGCCTCTCTTTTTGGAGCAGAAGGTGATGTCACGGAGAAACCCATAGACCCTATCAAGGTATACTCAGATAAGGAGTTAATCAGGGAAGTCGAGAAGATTGCATCTATCCTTGTGCCTGAAAAAGACTGGTCCATTCGTATTGCTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGCGCTACTGATTATGCTTGTTTTCGTGGACTCCTGAAGCAACTTGGCGGACCTTTAAGTACACAATTGTCAGACAGAAGATCTAGCATTGTAAAGCAGGCTTGCCATTTATTGTGCTTTTTGTCAAAGGAACTCCTGGGCGACTTTGAAGCATATGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTCCTCGCGTGCTTCCTCGTATAGCAGATTGTGCTAAAAATGACCGCAATGCAATACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCGGATGCACCAGAAATACTTCGTTCAGCTGAGTTATATGAGGATATGATAAAGTGTTGCGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTGTCGTCGCCTATTTACATCCTTTGACCCTGTTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACACAAGCGACATGCTTCACCTTCCATTCGTGATAGAGGTACACTGATGTCTTTACCCAGTCAAGCCTCTGCTTCGTCTAATCCACCTGGTTATGGAACATCTGCAATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACATCTGTCTCCTCTGGCGTACTTCTTTCACAGGCTAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAGAGCATGCTTAGAGGCTTGAATATATCTGATAAGCATAATCTATCGTCTCTTCGGTCATCAAGTTTGGATCTAGAAGTTGACCCTCCATCGGCTCGTGATCCGCCTTTCCCAGCTGCTGTCTCTGCATCCAATCATTTGACAAGCTCTTCAACAACAGAACCTACTGCTTATGGTGTCTATAAAGGTAGTAACCGGAATGGTGGTCTGGGTTTGTCAGACATAATCACTCAAATTCAAGCTTCCAAAGATTCTGCCAAGTCATCATATCATAGTAATGTTGAAACCGAGCCATTACCATCATTATCCTCATATTCAACTAGAAGGCCTTCTGAAAGATTACATGAAAGAAGTTCTGTTGATGACATTAGTGACATTAGGGAGGCTAGGCGATTTACTAACCACAACACTGATAAGCAGTATCTGGATGCCCCTTACAGAGATGGAAACTTTAGAGAATCACATAATAGTTATGTGCCTAATTTTCAGAGGCCACTAGTGAGAAAGAATGTAGCCGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAACCAGCTATCTCCTGCAGAGATGTCAGGTTATACAGATGGACCAGCATCTCTTCATGAAGCTTTGAGAGAAGGACTCAGGTCAGGTTCTGACTGGTCTTCTAGGGTTGCTGCCTTTAACTATCTTCACTCATTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGACCCTCACCATAAAGTTGCGCAGGCTGCTCTTTCAACACTAACAGATATTGTTCCGGCGTGTCGAAAGCCTTTTGAGGGTTACATGGAAAGAATACTACCACATGTCTTTTCTCGGTTAATTGATCCTAAAGAAGTTGTTAGGCAACCATGTTCAACAACATTGGAAGTTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCACTGTTACGTTCACTAGACGAACAAAGGTCTCCAAAGGCTAAATTGGCCGTGATTGAATTTGCAATCAATTCCTTTAACAAGCATACAATGAATGCAGAAGGCGCGGCTAATATTGGCATACTAAAATTGTGGCTTGCTAAGTTAACCCCTTTGGTTCATGACAAGAATACCAAGCTTAAAGAAGCAGCTATTACTTGCATTATATCAGTGTATACTCATTTTGATTCAATTGCAGTTCTTAATTTCATTCTGAGTTTGTCAGTGGAAGAACAAAATTCTTTGAGACGAGCCCTTAAACAGTACACTCCTCGCATTGAAGTAGAACTAATAAACTATATGCAGAATAAGAAAGAGCGACAACGATCCAAGTCTTCCTATGATCCATCTGATGTTGTAGGAACATCATCTGAAGATGGGTATGTTGGTTTCTCCAGAAAAACTCAATACCTTGGAAGATATTCGGTTGGTTCCCTAGATAGTGATGGTGGTCGGAAGTGGAGTTCCCAGGATTCAACTCTTTTGAAATCCAGTCTTGGTCCAGCAGCATCTGTTGAAAGAGAGGATCATAGTCATAATCATAACCATAACCTTGAGACTGACTCTAATTTGGACAGTCTTAGCTCAAAACCTAAAGATCTTGCATATTCAGTCAATCCAATGGGTCAAAATTTTGGCGCTCAATCTAGCCAACTTGGACAAGTGGACAGTAGAATGAATTTCGAGGGTCTTTCAACTCCTCGTCTAGATGTTAATGGTCTGATGTCATTAGATCGTTTAGATGTTGGTGATGGCTATGCACATGACGAAGAATTTTCTTCTGCATTGGAACCTAATTATCACTCAACTGAAGCTGTAAAGATTAATTCTATGACAGACACTGGGCCCAGCATTCCTCAAATTCTTCATACGATATTCAATGCTAATGAGGGAAGCCATGTTTCAAGTAAACAGACTGCACTTCAACAGTTATTAGAAGCTTCTACTACAAATGATGAGTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTACTGGATGATTCGGATTCCTCAGTCAGAGAGCTTGCTCTTTCATTGATAGTAGAAATGCTAAAAAACCAGCAGAAAGATGCATTGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTTATGTTACAAAAGATATTGTTCCTAAGGTTTCAAATGAAGCAGAGCACTGTCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTCTAAGTGTTATTGCCCCTCTACTGGTTACCGAGGATGATAAAATGCTTGTCACTTGCATTAATTGCTTAACAAAGCTTGTGGGCAGGTTCACTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTACCTGCTCTTTTCGAAGCTTTTGGAAACCAAAGTGCAGATGTTCGTAAGACAGTTGTTTTCTGTTTGGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGCCTCAACAGCACACAGTTGAAGCTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACGGGAAAAACAATTGATGCCGTTCATGATTAG 4347 0.4221 MEEALELTRAKDTKERMAGVERLYQLLEASRKSLTSSEVTSLVDCCIDLLKDNNFRVSQGALQSLASAVVLSGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTSAINLFSSTELPLQRAILPPVLQLLSDPNLAVREAAILCIEEMYKQAGPQFRDELHRYNLPSSLVKDINARLEGIQPNVRSSNGIQSGYVSGEIKPLNPKKSSPKAKSSSREASLFGAEGDVTEKPIDPIKVYSDKELIREVEKIASILVPEKDWSIRIAAMQRIEGLVLGGATDYACFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVPRVLPRIADCAKNDRNAILRARCCEYALLVLEHWPDAPEILRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERCRRLFTSFDPVIQRLINEEDGGIHKRHASPSIRDRGTLMSLPSQASASSNPPGYGTSAIVAMDRSSSLSSGTSVSSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLNISDKHNLSSLRSSSLDLEVDPPSARDPPFPAAVSASNHLTSSSTTEPTAYGVYKGSNRNGGLGLSDIITQIQASKDSAKSSYHSNVETEPLPSLSSYSTRRPSERLHERSSVDDISDIREARRFTNHNTDKQYLDAPYRDGNFRESHNSYVPNFQRPLVRKNVAGRMSAGRRRSFDDNQLSPAEMSGYTDGPASLHEALREGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLTDIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHTMNAEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYTHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRIEVELINYMQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKTQYLGRYSVGSLDSDGGRKWSSQDSTLLKSSLGPAASVEREDHSHNHNHNLETDSNLDSLSSKPKDLAYSVNPMGQNFGAQSSQLGQVDSRMNFEGLSTPRLDVNGLMSLDRLDVGDGYAHDEEFSSALEPNYHSTEAVKINSMTDTGPSIPQILHTIFNANEGSHVSSKQTALQQLLEASTTNDESVWTKYFNQILTVVLEVLDDSDSSVRELALSLIVEMLKNQQKDALENSVEIVIEKLLYVTKDIVPKVSNEAEHCLTIVLSQYDPFRCLSVIAPLLVTEDDKMLVTCINCLTKLVGRFTQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKTIDAVHD 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03773 1448 PANTHER CLASP 32 1434 - -
Vivi6g03773 1448 MobiDBLite consensus disorder prediction 1099 1115 - -
Vivi6g03773 1448 SUPERFAMILY ARM repeat 7 400 IPR016024 -
Vivi6g03773 1448 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Vivi6g03773 1448 Pfam HEAT repeat 160 188 IPR000357 GO:0005515
Vivi6g03773 1448 Gene3D - 265 505 IPR011989 -
Vivi6g03773 1448 SUPERFAMILY ARM repeat 288 1438 IPR016024 -
Vivi6g03773 1448 MobiDBLite consensus disorder prediction 675 711 - -
Vivi6g03773 1448 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Vivi6g03773 1448 Gene3D - 1 221 IPR011989 -
Vivi6g03773 1448 Gene3D - 1215 1440 IPR011989 -
Vivi6g03773 1448 Gene3D - 798 1019 IPR011989 -
Vivi6g03773 1448 MobiDBLite consensus disorder prediction 1094 1130 - -
Vivi6g03773 1448 MobiDBLite consensus disorder prediction 632 650 - -
Vivi6g03773 1448 FunFam Protein peg1 264 511 - -
Vivi6g03773 1448 SMART TOG_3 782 1028 IPR034085 -
Vivi6g03773 1448 SMART TOG_3 3 224 IPR034085 -
Vivi6g03773 1448 SMART TOG_3 280 511 IPR034085 -
Vivi6g03773 1448 SMART TOG_3 1203 1440 IPR034085 -
Vivi6g03773 1448 MobiDBLite consensus disorder prediction 612 650 - -
Vivi6g03773 1448 MobiDBLite consensus disorder prediction 675 698 - -
Vivi6g03773 1448 Coils Coil 10 30 - -
Vivi6g03773 1448 MobiDBLite consensus disorder prediction 226 259 - -
Vivi6g03773 1448 Pfam CLASP N terminal 282 498 IPR024395 -
Vivi6g03773 1448 Pfam CLASP N terminal 801 991 IPR024395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03773 Vivi-Chr6 132875645 132892540 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03773 K16578 - gmx:100820523 2412.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03773 6 132875645 132892540 Vivi6g03773 6 132875645 132892540 ECH
Vivi6g03773 6 132875645 132892540 Vivi1g06733 1 157716143 157731920 PCT