Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06733 ATGGAGGAAGCACTGGAACTGGCACGCGCCAAGGACGGCAAGGAAAGGATGGCTGGCGTGGAGCGACTCCACCAAGTTCTAGAAGCTTCCAGAAAGAGTCTCAGTTCAACCGAAGTTTCTTCTCTCGTCGATTGTTGCTTGGATCTCTTGAAGGATAGTAGTTTTAGGGTCTCTCAAGGCGCGCTTCAAGCTTTGGCTTCCGCTGCTGTTCTCTCCGGCGATCACTTTAAACTTCACTTTGATACACTTGTTCCTGCTATCGTTGATCGGTTAGGTGATGCTAAGCAGCCTGTTCGTGATGCGGCTAGAAGGCTTTTGCTCACTCTCATGGAGGTTTCATCTCCTACAATAATTGTTGAAAGAGCAGGGTCTTTTGCTTGGACATGCAAAAACTGGAGAGTCAGAGAGGAGTTTGCGCGAACTTTGACATCTGCAATTGGGCTATTCTCATCTACTGAACTACCCCTCCAGCGGGCTATTCTTCCTCCTACTTTGCAATTGCTGAGTGATCCAAATCCTGTTGTCAGGGAAGCAGCTATTTTGTGCATTGAGGAAATGTTTGCACAAGCTGGGTCTCAGTTTCGCGATGAACTTCAGCGTCATGACCTCCCGTCTTCTTTGGTGAAATATATTAATGCTAGGCTAGAGGGGATTCAACCAAAAGTCCAGTCTTCAAATGGTATTTCTAGTGGTTATAATATTCCTGGTGAAATTAATCCTTCAAGTGTAAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAAGGGCACATCACTTTTTGGAGGAGAAGGTGATGTCAGTGAGAAAGCCATAGAACCTATCAAGGTGTATTCAGAGAAGGAATTCATCAGGGAAATTGAGAAGATTTCATCTACCCTTGTACCAGAGAAGGACTGGTCAATACGAATTGCTGCCTTGCAGAGAATTGAACGTCTTGTTTTGGGAGGAGCTGCTGATTATCCATGTTTTTTTGGAATCCTAAAACAGCTAGTTGGACCTTTAAGCACACAACTCTCAGATCGAAGGTCTACCATTGTGAAGCAGGCATGCCATCTATTATGCTTTTTATCGAAAGACCTCTTGGGTGATTTTGAAGCATGTGCTGAAACTTTCATACCAGTCCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAGACGATGCTACGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGGATTGTTGATTGTGCTAAAAATGATCGTAGTGCAATACTTCGTGCAAGGTGTTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCACCAGAAATACAGCGATCAGCAGATTTATACGAGGATATGATAAGGTGTTGTGTTTCAGATGCAATGAGCGAGGTGCGGTCGACTGCAAGGATGTGCTACAGAATGTTCGCAAAAACTTGGCCTGAGCGTTCCCGTCGCCTATTTTCATCATTTGACCCTTCTATTCAAAGGTTGATAAATGAAGAGGATGGAGGCAAACATAGGCGCCATGCATCACCTTCCATTCGTGATAGAAGTGCACCAATCCCATCAACTAATCAAGCATCAAATCCCGCTAATCTAACTGGATATGGAACTTCAGCTATTGTTGCCATGGACAGAAGTTCTAGTTTATCATCGGGGACTTCTATCTCCTCTGGTGTTCTTCTTTCACAAGCTAAGTCACTTGGTAAAGGTACAGAACGTAGTTTAGAAAGTGTACTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAGAGCATGCTTAGAGGTTTGGATTTGTCAAATAAGCATAATTCATCTGCTCTGCGATCTTCAAGTTTGGATCTAGGAGTTGACCCGCCCTCATCTCGTGATCCTCCATTCCCTGCTTCTGTTTCAGCCTCTAACCATCCGACCATCCTTTCAACAACCGAATCATCTGGTTTGGGTGTCAATAGAGCTAGTAGCCGGAACAGTGGTATGGGTTTGTCTAATATAATCACCCAAATTCAAGCTTCCAAAGATTCTGACAAGTTTTCATATTATAGCAATAACGGTATTGAGCCTTCATCAGATTTTTCATCATACACAAATAAAAGAGCTACTGAAAAATTACAAGGAAGAAGTTCTGTTGATGAAAACAGTTATATCAGGGAGACTAGGCGATATGCGAGCCCCAATGTGGATAGGCAGTATACAGATACCCTCTATAGAGATGGAAACTTTAGGGATTCACAGAATAGTCATGTGCCTAATTTTCAGAGGCCTCTATTGAGAAAGAACGTAACTGCACGCGTGTCTGCTGGCAGGAGAAGGAGTCTTGATGATAGTCAATTATCTATTGGAGAGATGTCAAATTATACAGATGGACCGGCATCTCTTCATGAAGCTCTGAGCGAAGGACTTAGTTCTGGTTCTGACTGGTCTGCCAGGATTTCTGCCTTTAATTACCTTCACTTGTTATTGGAGCATGGTCAAAAGGGAGTTCAAGAAGTAGTTCAGAATTTTGAGAAAGTAATGAAGTTATTTTTTCAGCACTTGGATGACCCCCATCATAAAGTTGCACAGGCGGCTCTCTCCACACTTGCAGATATTATTCGTACATGCCGAAAGCCGTTTGAGAGTTACATGGAACGAATGTTACCCCATGTGTTTTCTCGTTTAATTGACCCCAAAGAGCTTGTTAGGCAAGCATGCTCTACGACTTTGGAGGCTGTTGGTAAAACGTACAGTATAGATTCTCTCTTGCCTGCATTGTTACGATCTCTTGATGAACAAAGGTCCCCAAAAGCTAAATTGGCTGTTATTGAGTTTGCAATCAATTCCTTTAACAAGCATACAATGAATCCAGAAGGTGCTGCTAATATTGGAATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTGGTTCATGATAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTATACTCCCACTTTGATTCGTCTGCAGTTTTGAATTTTATTCTTAGTTTATCCGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAGGTAGACTTAATGAACTATCTGCAGAACAAGAAAGAGCGGCGTACTAAATCTTCCTATGATCCATCTGATGTTGTAGGAACATCCTCTGAAGAGGGATATGCTGGTTTGTCTAGGAAAGCTCATTATATGGGGAGGTATTCTGGCGGTTCTCTAGATAGTGACGGTGGCAGGAAATGGAGTTCCCAAGATTCTAACTTGATTATAGCCAGTCTTGGCCAACCAGCTTCTGATGAAACAGAGGAACATTTGTATCATAATCCTCAAACTAATTGTGATAATAGTATTGTTGGTTCAAAAACCAAAGATCTTGCTTACCCAGTCAAGTCAATGGATCAAAGCTTTGGCTTTCAAACTGACCACCAACTTGGATATGAGGATAGTAGCATTAACTTTGAAGGCATATCATCTGATGTGAATGTTAATGGTCTGATGTCATTAGAACATTTAAATATTTCCGAATTGAACCATAATCATCACTCAGCTGAAGATATGAAGGGCAACTGCATGACAAACATAGGACTCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCACTATTTCAAGTAAGCGGACTGCACTTCTACAGTTAGTTGAAGCTTCTGCAGAAAATGATCATTCTGTTTGGATCCAGTACTTCAATCAGATTTTGACTGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTTTCATTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAAATTCAGTTGAGATTATAATTGAAAAGCTCCTTAATGTTACAAAGGATATTGTTCCCAAGGTTTCAAATGAAGCAGAGCACTGCCTGACAATTGTTTTATCTCAGAATGATCCATTTAGATGCTTAAGTGTTATAATTCCTCTTCTGGTTACCGAGGACGAGAAAACTCTAGTCACTTGCATAAATTGCTTGACTAAGATTGTGGGGCGGCTCTCTCAGGAGGAATTGATGGCTCAGTTACCCTCATTTCTGCCCGCATTGTTTGAAGCTTTTGGAAACCAGAGTGCGGATATTCGTAAGACTGTTGTTTTCTGTCTAGTGGATATTTATATCTTGCTTGGGAAAGCATTCTTGCCATATTTGGAAGGGCTTAACAGCACACAGTTGAAGTTGGTTACCATTTATGCAAATCGTATCTCACATGCAAGGACAGGAAAATCAATTGATGCTGCTAACGATTAG 4308 0.4171 MEEALELARAKDGKERMAGVERLHQVLEASRKSLSSTEVSSLVDCCLDLLKDSSFRVSQGALQALASAAVLSGDHFKLHFDTLVPAIVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKNWRVREEFARTLTSAIGLFSSTELPLQRAILPPTLQLLSDPNPVVREAAILCIEEMFAQAGSQFRDELQRHDLPSSLVKYINARLEGIQPKVQSSNGISSGYNIPGEINPSSVNPKKSSPKAKSSSKGTSLFGGEGDVSEKAIEPIKVYSEKEFIREIEKISSTLVPEKDWSIRIAALQRIERLVLGGAADYPCFFGILKQLVGPLSTQLSDRRSTIVKQACHLLCFLSKDLLGDFEACAETFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIVDCAKNDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPSIQRLINEEDGGKHRRHASPSIRDRSAPIPSTNQASNPANLTGYGTSAIVAMDRSSSLSSGTSISSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSNKHNSSALRSSSLDLGVDPPSSRDPPFPASVSASNHPTILSTTESSGLGVNRASSRNSGMGLSNIITQIQASKDSDKFSYYSNNGIEPSSDFSSYTNKRATEKLQGRSSVDENSYIRETRRYASPNVDRQYTDTLYRDGNFRDSQNSHVPNFQRPLLRKNVTARVSAGRRRSLDDSQLSIGEMSNYTDGPASLHEALSEGLSSGSDWSARISAFNYLHLLLEHGQKGVQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIRTCRKPFESYMERMLPHVFSRLIDPKELVRQACSTTLEAVGKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHTMNPEGAANIGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRTKSSYDPSDVVGTSSEEGYAGLSRKAHYMGRYSGGSLDSDGGRKWSSQDSNLIIASLGQPASDETEEHLYHNPQTNCDNSIVGSKTKDLAYPVKSMDQSFGFQTDHQLGYEDSSINFEGISSDVNVNGLMSLEHLNISELNHNHHSAEDMKGNCMTNIGLSIPQILHMICSGGDGSTISSKRTALLQLVEASAENDHSVWIQYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIIIEKLLNVTKDIVPKVSNEAEHCLTIVLSQNDPFRCLSVIIPLLVTEDEKTLVTCINCLTKIVGRLSQEELMAQLPSFLPALFEAFGNQSADIRKTVVFCLVDIYILLGKAFLPYLEGLNSTQLKLVTIYANRISHARTGKSIDAAND 1435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06733 1435 MobiDBLite consensus disorder prediction 606 653 - -
Vivi1g06733 1435 SMART TOG_3 785 1030 IPR034085 -
Vivi1g06733 1435 SMART TOG_3 3 224 IPR034085 -
Vivi1g06733 1435 SMART TOG_3 271 515 IPR034085 -
Vivi1g06733 1435 SMART TOG_3 1188 1429 IPR034085 -
Vivi1g06733 1435 MobiDBLite consensus disorder prediction 501 535 - -
Vivi1g06733 1435 Pfam CLASP N terminal 286 501 IPR024395 -
Vivi1g06733 1435 Pfam CLASP N terminal 808 998 IPR024395 -
Vivi1g06733 1435 Gene3D - 267 510 IPR011989 -
Vivi1g06733 1435 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Vivi1g06733 1435 MobiDBLite consensus disorder prediction 226 262 - -
Vivi1g06733 1435 MobiDBLite consensus disorder prediction 630 653 - -
Vivi1g06733 1435 MobiDBLite consensus disorder prediction 606 620 - -
Vivi1g06733 1435 MobiDBLite consensus disorder prediction 520 535 - -
Vivi1g06733 1435 Gene3D - 798 1022 IPR011989 -
Vivi1g06733 1435 PANTHER CLASP 32 1421 - -
Vivi1g06733 1435 FunFam Protein peg1 267 514 - -
Vivi1g06733 1435 MobiDBLite consensus disorder prediction 226 266 - -
Vivi1g06733 1435 SUPERFAMILY ARM repeat 3 1406 IPR016024 -
Vivi1g06733 1435 Coils Coil 1271 1291 - -
Vivi1g06733 1435 Gene3D - 1216 1426 IPR011989 -
Vivi1g06733 1435 Gene3D - 1 222 IPR011989 -
Vivi1g06733 1435 Pfam HEAT repeat 160 186 IPR000357 GO:0005515
Vivi1g06733 1435 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06733 Vivi-Chr1 157716143 157731920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06733 K16578 - gmx:100801377 2343.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06733 1 157716143 157731920 Vivi1g06733 1 157716143 157731920 ECH
Vivi6g03773 6 132875645 132892540 Vivi1g06733 1 157716143 157731920 PCT