Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03761 ATGACATGCATTTCGAAACCATTCAATGCCACCGTTTTCCACAAACATTCATCCCCTTTCCCTCAATTTCCATCCCGCCTCCATTCTAATGCACACTCTTTTTTTCACTCAAACACATTCCGCTCCACGAAAAGCATCAATATCTCATCCCACGCCGTTCCTCCTCTCCCCCAAAACCAAATCATCATCGGATGCGGAATGACGACGGTGGATATCTTAGCTACCGTGGACGGATATCCGAAACCGGACGATAAGATCCGAACAACCTCCTCTAAGGTGCAAGGAGGCGGAAATGCCGGTAATGCTTTAACATGTGCGGCTCGACTCGGTTTGAAACCCAAGCTTATTTCCAAGGTTGCTGATGATGCTAGAGGAAAGAGCATATTGGAGGAACTTGAAGCTGATGGTGTCGATACTTCCTTTATTATTGTATCCAAGGGTGGTAGTTCTACATTTTCATATGTACTTGTAGACAGCCAAACAAAAACTCGCACAAGTATTTACACCCCTGGAGATCCTCCCTTAATGCCAGATGATTTGTCTCAGTCAATGTTGTTGTCTGCATTTGATGGAGCAAGATTAGTTTATTTTGATGGAATGTCTATCGAAACTGCTCTATTTGTGGGACAAGAGGCAGCTCGCAATAATATTCCTATTTTAGTTGAGGCAGAATCGCCAAGGGAAGGGTTGGATGAGCTATTGAAGCTTGCTGATTTTGTTGTATGTTCAGCAAAGTTTCCACTGGCTTGGACACAGGCACCATCTATCCCAAGTGCATTGGTTTCCATGCTTATAAGATTGCCAAATGTCAAGTTTGTGATTGTGACTCTGGGTGAAGATGGCTGTCTAATGTTGGAGAGAAGTACAAATGAGGATGTCGGCATAGAAGAAAGGAATGTAGAGAGCTTCTTAGAACTCTTGTACAAAGAGAAAGATGATAGCTTGGCTATTCCAACCTGCATATCATCGGTGGTGAGAAAGTTCAGATCAAATGGAATAGGCACAGTTTGTGGGAGATTCTTTATCGGAACAGCAGAGAAGATACCAGATTCTGAGCTTATTGATACAACAGGTGCCGGGGATGCATTTATTGGAGCAATTATGTATGCCATTTGCTCAAACATGGTACCAGAGATAATGTTACCCTTTGCTGCACAAGTAGCAGCTGCCAAGTGTAGAGCTTTGGGAGCTCGAACCGGTCTTCCTCACCGAACAGATCCATGCTTAACATCCTTTTTATGCTGA 1245 0.4369 MTCISKPFNATVFHKHSSPFPQFPSRLHSNAHSFFHSNTFRSTKSINISSHAVPPLPQNQIIIGCGMTTVDILATVDGYPKPDDKIRTTSSKVQGGGNAGNALTCAARLGLKPKLISKVADDARGKSILEELEADGVDTSFIIVSKGGSSTFSYVLVDSQTKTRTSIYTPGDPPLMPDDLSQSMLLSAFDGARLVYFDGMSIETALFVGQEAARNNIPILVEAESPREGLDELLKLADFVVCSAKFPLAWTQAPSIPSALVSMLIRLPNVKFVIVTLGEDGCLMLERSTNEDVGIEERNVESFLELLYKEKDDSLAIPTCISSVVRKFRSNGIGTVCGRFFIGTAEKIPDSELIDTTGAGDAFIGAIMYAICSNMVPEIMLPFAAQVAAAKCRALGARTGLPHRTDPCLTSFLC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03761 414 PRINTS Ribokinase signature 273 284 IPR002139 GO:0016301
Vivi6g03761 414 PRINTS Ribokinase signature 64 85 IPR002139 GO:0016301
Vivi6g03761 414 PRINTS Ribokinase signature 91 110 IPR002139 GO:0016301
Vivi6g03761 414 Pfam pfkB family carbohydrate kinase 346 403 IPR011611 -
Vivi6g03761 414 Pfam pfkB family carbohydrate kinase 66 290 IPR011611 -
Vivi6g03761 414 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 47 413 - -
Vivi6g03761 414 CDD ribokinase_group_B 61 403 - -
Vivi6g03761 414 Gene3D - 61 399 IPR029056 -
Vivi6g03761 414 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 355 368 IPR002173 GO:0016301
Vivi6g03761 414 SUPERFAMILY Ribokinase-like 61 405 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03761 Vivi-Chr6 132623744 132629351 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03761 - - gmx:100792838 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03761 6 132623744 132629351 Vivi6g03761 6 132623744 132629351 ECH
Vivi6g03761 6 132623744 132629351 Vivi1g06694 1 155069167 155074888 PCT