Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06694 ATGTCGAATCTATGCACGCCTTCTTCTAACACTACTGCTTCTTCAACTTTCAATTTCAACCTTCAACCTCTCAAATTCCACAACTCAACAAGGAACCATCGCACCAGAAATTTCAGGGTTAAAATGTGCTCCTCCGTTCCTCAAAACGCCACCGTAGTTGGTTGTGGATCGCTAACCGTCGATTTCTTGGCTACCGTTGCTGCTTACCCTAAGCCAGATGATAAAATCAGAACCACCACCTTGAAGGTTCAAGGTGGTGGCAATGCAGCCAATGCTTTAACCTGTCTCGCTCGCTTAGGTCTAAACACAAGGCTTATTTCTAAGATTGCAGATGACAGCCAAGGCAGGGGTATGTTAGACGAACTACAAGTTGATGGTGTAGATACATCTTTTATTGTGGTGTCTAAAGAGGGAATTTCACCATTTACATATATTATTGTGGACAACGAAACGAAAACTCGCACTTGTATACATACCCCTGGATATCCTCCAATGATACCCCAAGATCTTTCAGAATCGAGTTTGTTATCTGTATTGGATGGAGCTAGCATTGTATATTTTGATGGGAGGTTATATGAAACTGCTCTAGTCGTTGCCCATGAGGCAGCTAGGAAGAATATACCCATCTTAATTGATGCAGAAAGACCAAGGGAAGGGTTGGATGATCTCCTGAAGTTAGCTGATTATGTTGTATGCTCAGCGAAGTTTCCAAAGGCATGGACAGAGACATCAACTATTCCACAAGCACTTGTTTCTATCCTTTTAAGGCTGCCCAATGTAAAATTTGTGGCTGTAACTTTGGGAAAAGATGGTTGTATAATGCTTGAGAGAAGTGTTAATGCAAGTCCTTCCACTGAAGAAGTGGATGTAGACAACTTATTGGAATCACTGGAGTTAAGAAAGGATAATAACGCATCCGTTCCAACCTGCATATCATCGTCAGTGGCAAAATTGAAGGCAGAAGGAACAGGAACAGTTACCGGGAAACTATACATTGGTACAGCTGAGAGCATTCCACCATCCGAGCTTATTGATACCACTGGTGCTGGCGATGCATTTATTGGAGCTGTGATCTACGCTATTTGTTCGAAGTTCTCCCTGGAGACAATGCTGCCCTTTGCTGCTAATGTGGCCGGTGCGAAATGCAGGGATCTAGGAGCTCGAAGCGGTCTTCCATACCGTGCAGACCCACGTTTAGCATCATTTATTAAGTAG 1215 0.4337 MSNLCTPSSNTTASSTFNFNLQPLKFHNSTRNHRTRNFRVKMCSSVPQNATVVGCGSLTVDFLATVAAYPKPDDKIRTTTLKVQGGGNAANALTCLARLGLNTRLISKIADDSQGRGMLDELQVDGVDTSFIVVSKEGISPFTYIIVDNETKTRTCIHTPGYPPMIPQDLSESSLLSVLDGASIVYFDGRLYETALVVAHEAARKNIPILIDAERPREGLDDLLKLADYVVCSAKFPKAWTETSTIPQALVSILLRLPNVKFVAVTLGKDGCIMLERSVNASPSTEEVDVDNLLESLELRKDNNASVPTCISSSVAKLKAEGTGTVTGKLYIGTAESIPPSELIDTTGAGDAFIGAVIYAICSKFSLETMLPFAANVAGAKCRDLGARSGLPYRADPRLASFIK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06694 404 PRINTS Ribokinase signature 54 75 IPR002139 GO:0016301
Vivi1g06694 404 PRINTS Ribokinase signature 263 274 IPR002139 GO:0016301
Vivi1g06694 404 PRINTS Ribokinase signature 81 100 IPR002139 GO:0016301
Vivi1g06694 404 Pfam pfkB family carbohydrate kinase 52 279 IPR011611 -
Vivi1g06694 404 Pfam pfkB family carbohydrate kinase 333 392 IPR011611 -
Vivi1g06694 404 Gene3D - 50 389 IPR029056 -
Vivi1g06694 404 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 39 403 - -
Vivi1g06694 404 SUPERFAMILY Ribokinase-like 50 396 IPR029056 -
Vivi1g06694 404 CDD ribokinase_group_B 52 393 - -
Vivi1g06694 404 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 345 358 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06694 Vivi-Chr1 155069167 155074888 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06694 - - gmx:100802550 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03761 6 132623744 132629351 Vivi1g06694 1 155069167 155074888 PCT