Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03758 ATGTTGCTAAGAAGCTCTTCAACACCAATTCTTGGTTCTCTGATATCTTCTTTCACAGACAGTCCTAATCATACTCATAGTCTTCACCTTGAATCCTGTCATATGCTTAATCATCTACCACCACCAACCACTCACAGACTCTCATGCAGTTCTTCTCCAATTTCCCCCTCCATTGCTGATCTTGAAAGGCAAAACAAAGGATTGATTAGAAGGGTTCAATCTGAGGGAAACTTGGAGGATTTAGCCTATGCTACTTGCAATAATGAAGAGAGATACAATCATATGGATCCTTCTAAGAGGTATTCAGGGAAGCAAAGAGGCTTGCCACTTGAGACAATTCCATCTTTCTCTCTTTCTAAACAAACAGGCTTGCGGGAAGAAGAGGAAGATGAAGAATCTGATATGGAAGAGGAAGGGTATGATGAGTTTAGTGTGATGAGTAGGATGATGGTGAGTGAAGAAGTGGAGGATAGAGTTTGCAGGGTGAGTTTTGGTGATGAGGGAGAGGTTGGTAATAGAGAAATGTATCTTGCAAAGGGGCTTGGTATTGATAGTTGTGGTGGTGGTGATGGCATAGGTGGTGGCTGCAGAGGAGGAGGAGGCAATGGAGGTGGTGATTATAATTCTATGGATTCTGACAGAAATGATGGTGATAATAATAATCATGGGGTGGAAGAATATTACAAGAAAATGGTGCAGCAAAATCCTGGGAATCCATTGTTCCTGAGGAATTATGCTCAATACTTGTATCAGTGCAAACAAGACCTTGAAGGAGCAGAGGAGTATTATTCCAGAGCCATATTAGCAGATCCAAATGATGGAGAAGTTTTATCACAGTATGGGAAGCTAATTTGGGAGCTACACCATGACGAAGAAAGAGCTTCAAGCTATTTTGAACGAGCAGTACAAGCCTCTCCTCTAGACAGCCATGTACAAGCAGCATATGCAAGTTTCCTTTGGGACACAGAGGAAGATGAGGGCACAGGTTACAATGACTCACAATGTTTCCCTCAACAATTTCATTTTGGAGAAATGGCCACTACCGGTGCTTAG 1053 0.4226 MLLRSSSTPILGSLISSFTDSPNHTHSLHLESCHMLNHLPPPTTHRLSCSSSPISPSIADLERQNKGLIRRVQSEGNLEDLAYATCNNEERYNHMDPSKRYSGKQRGLPLETIPSFSLSKQTGLREEEEDEESDMEEEGYDEFSVMSRMMVSEEVEDRVCRVSFGDEGEVGNREMYLAKGLGIDSCGGGDGIGGGCRGGGGNGGGDYNSMDSDRNDGDNNNHGVEEYYKKMVQQNPGNPLFLRNYAQYLYQCKQDLEGAEEYYSRAILADPNDGEVLSQYGKLIWELHHDEERASSYFERAVQASPLDSHVQAAYASFLWDTEEDEGTGYNDSQCFPQQFHFGEMATTGA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03758 350 Coils Coil 118 138 - -
Vivi6g03758 350 SUPERFAMILY TPR-like 225 324 IPR011990 GO:0005515
Vivi6g03758 350 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 323 - -
Vivi6g03758 350 Gene3D Tetratricopeptide repeat domain 212 328 IPR011990 GO:0005515
Vivi6g03758 350 MobiDBLite consensus disorder prediction 94 140 - -
Vivi6g03758 350 SMART hat_new_1 254 286 IPR003107 GO:0006396
Vivi6g03758 350 SMART hat_new_1 219 251 IPR003107 GO:0006396
Vivi6g03758 350 SMART hat_new_1 289 321 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03758 Vivi-Chr6 132610123 132612388 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03758 - - gmx:100788436 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03758 6 132610123 132612388 Vivi6g03758 6 132610123 132612388 ECH
Vivi6g03758 6 132610123 132612388 Vivi1g06617 1 152583209 152588414 PCT