Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06617 ATGTTTACTAGGTCAAGAGATGCTAGTGCTTTTAGTATATTCAAATGGAAGCGACAACGTGAATTGTCAGTGACGGAACATTTACTTCAGGATGTTGCTCCCGAGATTGAATTGTCTGATTATAGAAGGATCCCGAGTCCAGGTAGTGAGAGTCCTTCAGGGTTTCTTAACAACGAGAATCGCAATGTTGAGCCGATTGCTGATTTGGATATCTTCTTTGAAAGACTTTACAGCTATTACTGTGAGAAAGGGTTATGGTGCATCATCATAAAGTGGATTGTTGAACTTCTGAGTCTGGGATTCACCATATGTTTTTCAGCTTTCTTTTTACTATATGTTGATTGGAATGGACTACGCAATGCAAGATGTGGGGTGAATGCGGTTGAATCTGGAAAGAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCTTTAACACCGTTAACACTTAGCAAAGCTATTATTGTTGGATACTTATGCATATTTTCTATCTATTGGCTATTTTGCTTCTTACGATTCTTTGCTCAACTGAAGTATACTCTGGAAATTCGAGAGTTTTACTACAATAGTCTCCATGTTACAGATAGTGAAATTCAAACAATGCTGTGGGCTACAGTTCTTGAAAAGACTGTTCTCGTGCAAAGCACAAGAAAACTCTGTGTGGTAAAGGATCTTAATGCTCATGACATCGTGATGAGGCTAATGCGGAAGGAGAACTACTTGATCGGAATGCTCAACAAGGGCGTGCTTGCTTTTCCCATTTCTCAGTGGATTCCAGGTGCTGGTCCAACAGTGAAATCCAGTGCAAATGGAACACAATATCGTCTAGTACTAACCAAGACACTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTTGATAGTAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAGGACATTAAAGAAAAGGCTTATCTTTGTTGGGCTTGCAATACTTTTACTTTCTCCATTTCTCGTCATATTCATGCTGGTATATCTCTTTCTGCGGCATGCTGAACAATTTTACAATCACCCAAGTACAGCATCATCTCGAAGATGGTCAAATTTGTCAAGATGGGTCTTTAGGGGATTCAATGAGGTGGACCATCTCTTCCGGCATCGGATTAATAACAGCGTAGTACATGCTTCTAATTATCTCAAGCAATTTCCTTCACCCATCATATCTATCATTGCAAAATTCATCTCGTTTGTATCTGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTAGAGGAATCTCTGCTAGAGGGTCATATATTTGGTCGAAACTTGTTGTGGTATGCGGCTGTTTTTGGAACCATAACTGCTATTAGCCGGGCTGCAATTGTAAATGAACTTCTAGTCATAGATCCTGAAGGAGCAATGTCTATGGTAGTTCAGCATACACATTATATGCCAAAGAGATGGCGTGGCAAACAAAGCACTGAAACGGTCCGAATTGAGTTTGAAACCTTATTCCAGTATACTGGGATGATGCTACTTGAGGAGATGGCCTCAATTTTCCTTACTCCGTACTTACTCATATTCGTTGTCCCAAAGCGTGTCGATGATATCTTGCAGTTCATTGCATATTTTACCGTACATGTTGAAGGTGTTGGCCATGTATGCAGTTTTAGTGTCTTTAATTTTCAAAAGCATGGAAACAGTAGTTATGGTTCCCCGTCTGATTCACCTCGCCACCAAAGGAGTTCCCAGGGGAAGTTGGAGAAATCGTTTTTGAGCTTCCAAAGTAGTTATCCTTCATGGGAACCAAACACTGAAGGGAAGAAGTTTTTGCTAAATCTGAGAACATTCAGAGAGCAAAAGTTATCATCAGGGCATGTAAACCGACAAGGATTTTCCCCTCTAAGATTATGGAGAGGCAGTCCCGACACGAGAACCAATGGAGACAACAGAAATAGGTTTATTTCCCGAGAAATGCCAAACAGCACTTTTGTAACCGGCAATCACTTAGGTTCATTGTGGTTTATTGAAGCCAACACTCAAAACAATCACCCGTATCTTCTCGATTGGTACTACTCTTCCCGACCTCATGATGCGACTTCAAGAGATGTTCCAACAGATCTATTCGAAGAAACTCCACTTAACTCCAGAGATTGGATGCACAATACTTCCCGACCTCATGATGGAACTTCAAGAGATGTTTCAACAGATCTATTTGAAGAAACTCCACATCACTCCAGAGATTGGATGCCGTCCAGCTTGACACAGAATGAACCTTACGAAGAATACATGAACGATTATCATGATGATCGCGTCAATTCCCATCTCGGAGCATCCGTATCTTCTCCCATCTTTAGGGAAAGCATAATTCGGAATCAAGATTCCGATGATCTCCACCGCCCAACCAGGAGTCATTGGTGGGCTAGAAGTCATCATCATCAGCAGGGTGGACATGATCAAGCAAGCTTTTACGAGCCTCCAGATTTCAATCACGAAAGAACATTCAATAATACCAACGATAAATTATCTGAGATAGGGTCAGAGAATCAAGACCAGGAGCAACAGTTGCATTGGCCAAACTCAGTTTATCACAAATCATTTCATTCTGCAAATACACATGACTTAGAATCAGGGGAAATCAATCTTCATTTTGACGACTTTTATAGAAGACCTTCAGAAAATTCCACTGTAAATCCTTTTGAGTGA 2694 0.4087 MFTRSRDASAFSIFKWKRQRELSVTEHLLQDVAPEIELSDYRRIPSPGSESPSGFLNNENRNVEPIADLDIFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSAFFLLYVDWNGLRNARCGVNAVESGKKPCDLAKEALHQHPLTPLTLSKAIIVGYLCIFSIYWLFCFLRFFAQLKYTLEIREFYYNSLHVTDSEIQTMLWATVLEKTVLVQSTRKLCVVKDLNAHDIVMRLMRKENYLIGMLNKGVLAFPISQWIPGAGPTVKSSANGTQYRLVLTKTLEWTLNWCILQSMFDSNFCVRRDFVSNPRTLKKRLIFVGLAILLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWVFRGFNEVDHLFRHRINNSVVHASNYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAIVNELLVIDPEGAMSMVVQHTHYMPKRWRGKQSTETVRIEFETLFQYTGMMLLEEMASIFLTPYLLIFVVPKRVDDILQFIAYFTVHVEGVGHVCSFSVFNFQKHGNSSYGSPSDSPRHQRSSQGKLEKSFLSFQSSYPSWEPNTEGKKFLLNLRTFREQKLSSGHVNRQGFSPLRLWRGSPDTRTNGDNRNRFISREMPNSTFVTGNHLGSLWFIEANTQNNHPYLLDWYYSSRPHDATSRDVPTDLFEETPLNSRDWMHNTSRPHDGTSRDVSTDLFEETPHHSRDWMPSSLTQNEPYEEYMNDYHDDRVNSHLGASVSSPIFRESIIRNQDSDDLHRPTRSHWWARSHHHQQGGHDQASFYEPPDFNHERTFNNTNDKLSEIGSENQDQEQQLHWPNSVYHKSFHSANTHDLESGEINLHFDDFYRRPSENSTVNPFE 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06617 897 MobiDBLite consensus disorder prediction 711 730 - -
Vivi1g06617 897 MobiDBLite consensus disorder prediction 835 850 - -
Vivi1g06617 897 PANTHER APG9 AUTOPHAGY 9 2 843 IPR007241 GO:0006914
Vivi1g06617 897 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Vivi1g06617 897 MobiDBLite consensus disorder prediction 804 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06617 Vivi-Chr1 152583209 152588414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06617 K17907 - gmx:100809347 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06617 1 152583209 152588414 Vivi1g06617 1 152583209 152588414 ECH
Vivi6g03758 6 132610123 132612388 Vivi1g06617 1 152583209 152588414 PCT