Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03704 ATGGATTCTCAATCCGTCACTAACCTCCGTCACTCCAACCTCTCACTCAATCCCAACCGTTCATCATTCCCATCTCCGTTATCATCTTCTCTCTCCTTCAGGTCCCTCCCACCACCGCAATTTCTCCCTCCGCCGTCGTTAAAGTTACAACCTATCAGAGCCTCATCCTCTCCAAACGACCCTGCGTTTCACCAACCTAGAAACCTCCCTCCCTTACCCAACCCATTCCAAGCCCTAACCTCTCTCTTCTCCCCCGTCGTAAAAACCACCTGCATCATCCTCGCCGCCACCGCCTTCTTCTTCACGCGCTTCCACCACAGTCCCGTCATCGCCGCCACACTCGCCACTCCGGCAAGCGTTGAAACCTCACCTGAGGCTGAAAACGAAAACGCTTCAGAAGGAGAACAAGCGGAGAAGCTTATCGAAGAGCGATTGAGTCAAAATCCAAACGACGCGGAAGCTCTTCGTTCTCTCATGGAAGTCAAAATCAAAGCACGGAAGGTCGATGAAGCGATTGGTATCATTAACCGTTTGATTGAGATTGAGCCTGAGGAAATGGAGTGGCCTCTATTGAAGGCTAACATGTATATCTACAACGACGACCATGAAACTGCGAAAAAACTGTTCGAAGAGATTCTGCAGAGAGATCCGCTTCGGGTAGAAGCTTATCACGGTCTTGTGATGGCGTCGTCGGATTCGTCGGAGTCTAATGAACCGTCGAATGAAACGATGAAAGGATTGTTGCAAAGGGTTGAAAAGGCATTGGAATTGTGCAAGAAGCAGAAGAGGGTTTCAGATGTTAGAGACTTTAGGTTATTGGTTGCTCAGATTAAGGTGATGGAAGGGAATTTCTCTGAAGCGCTTAAAGCCTATCAGGAGTTGGTAAAAGAAGAACCGAGAGACTTCAGGCCTTATCTGTGTCAGGGTATTATTTATACCTTGCTTAGAAAGAAAGATGAAGCTGAGAAGCAATTCGATCAGTTTCGTAGGCTTATTCCCAAGAATCATCCTTATAGAGAGTATTTTGATGATAACATGTATGGCACCAATTTTTTCGCGCCAAAATTTGAGAGCGAAAGAGCTGGTGCTAGGAGTTAA 1098 0.4699 MDSQSVTNLRHSNLSLNPNRSSFPSPLSSSLSFRSLPPPQFLPPPSLKLQPIRASSSPNDPAFHQPRNLPPLPNPFQALTSLFSPVVKTTCIILAATAFFFTRFHHSPVIAATLATPASVETSPEAENENASEGEQAEKLIEERLSQNPNDAEALRSLMEVKIKARKVDEAIGIINRLIEIEPEEMEWPLLKANMYIYNDDHETAKKLFEEILQRDPLRVEAYHGLVMASSDSSESNEPSNETMKGLLQRVEKALELCKKQKRVSDVRDFRLLVAQIKVMEGNFSEALKAYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFDQFRRLIPKNHPYREYFDDNMYGTNFFAPKFESERAGARS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03704 365 Pfam Tetratricopeptide repeat 135 191 - -
Vivi6g03704 365 ProSiteProfiles TPR repeat profile. 268 301 IPR019734 GO:0005515
Vivi6g03704 365 MobiDBLite consensus disorder prediction 1 36 - -
Vivi6g03704 365 MobiDBLite consensus disorder prediction 1 70 - -
Vivi6g03704 365 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 27 336 - -
Vivi6g03704 365 SMART tpr_5 152 185 IPR019734 GO:0005515
Vivi6g03704 365 SMART tpr_5 268 301 IPR019734 GO:0005515
Vivi6g03704 365 SMART tpr_5 186 219 IPR019734 GO:0005515
Vivi6g03704 365 SMART tpr_5 302 335 IPR019734 GO:0005515
Vivi6g03704 365 MobiDBLite consensus disorder prediction 117 136 - -
Vivi6g03704 365 SUPERFAMILY TPR-like 135 337 IPR011990 GO:0005515
Vivi6g03704 365 ProSiteProfiles TPR repeat profile. 152 185 IPR019734 GO:0005515
Vivi6g03704 365 Pfam Tetratricopeptide repeat 281 333 - -
Vivi6g03704 365 Gene3D Tetratricopeptide repeat domain 130 350 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03704 Vivi-Chr6 131784789 131786195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03704 - - gmx:102661172 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03704 6 131784789 131786195 Vivi1g06789 1 160164079 160165203 PCT