Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03486 ATGGCGACGAAGCTCAAGTATCTATCCTCCATTGCTAAAGACGTCGTCACTAGATGCGCACAGAAATTGGACATCACGGTAGAGAAATTGGTGGAAGATTTCGAGCGAGGACGGACTCTTGATGCAGGAAACTATTGCAAAAATTTAGTTGAGTTTTGCAGTGGGAAGGTTCTGAGTGATATGTGCTGTAAATTAGAGGAAGAAATCAATAATGGTTCGTTTGGTAGGTTATCCTTTGACATTATGCTTGCTTGGGAAAGGCCTTCCTACTATGATGACAACGAATGCCTGGAAGTTGAAGCAAAGGAGAAAGAAGAAAAGAAGAAGCCTGTGAAAACTACACCAGAACAAGATGATATCTCTCTTTTTTATTCAGACATCATGCCCCTTCTTGTTACGAATGAGCCGAGTGTTGGAGAGGATGCATTTGTATGGTTGGGATCATTAGTTCCATTAGCTGCGGATGTAACAAATGGAAGGTTTACTTTTGAATCTTTAACCGCACCGACAGGCTTCCAACTACATTTTCCAGCATATGACATGTTCTTGAAAGAAATGGCCAAGTGCATAAGACATTTGCAGAAACAGGCAATGCCAACTGGTGTGGAACTAGCGGAAGACGAATATATATTACATGTAGAAGGAACGGCCAGCTCTCAGAGAGTAATTCGCCACATTGGATCGACAAGTTGGCCTGGTAGACTTACACTGACCAATTATTCTCTTTACTTTGAGACGTCGGGAGTAATTAAGTACGAGGATGCTCTCAAAATAGACCTATCTAAGGATATTGAGCAGAGTGTTGAACCATCTGCCACAGGGCCATGGGGAGCCCAACTTTTTGACAAGGGCATAGTGATCGAATCATCTGAATTATCAGAGGGAGTTGTGCTGGAGTTTCCAGAGCTTACAAGTTCTACAAGACGCGACCACTGGCTTGCATTAATAAGGGAGATAATGTTTCTCCATCAGTTTTTATCGAAGTACCAGATAAAATGTCGAATACAAACATGGGAGATGCATGCAAGGACAATATTAGGAATCATAAGGCTTCATGCAGCAAGAGAAATGCTAAGAATATCACCTCCTGTCCCAACAAAATTCTTAATATTTTCCTTATATAATGAAATACCAAAGGGTGATTATGTGCTAGAAGAGCTTCCTGATGTCCTTAGAAAAGTTAAGACTGGACAGCCATGTAGCGCAAATTCTCTACTTAGGAGTATGAACATTGCTGGCCCAGTAGTCTCCGATTCGATTGTAGAAGAGGTGAGTCAGGCAGACAAAAGTGTGGATGCTTTAGACGATAGTCCCCCGTTGGAGTCTGCTAGTACACAATCTAGGGAGGAGGAAAAGAAAGTTCTCGCTGCAAAAGCTACTACTAAAGAATTAAAGGAAGAAGGAGTTGCGAAAGGTACCACTAAAGAATTAAAGGAAAGATCCACTGACAATCTTCTGGTTCTAACTCCCTCGCTGGAGTGTGCTATTAAACAATCTAGGGAGGAAGAAAAGAAAGTTCTTGTTGCGAAAGCTACCACTGAAGAATTAAAGGAGGAAGGAGTCACAGACAGTGTTCTGGTTCTAACGGAACTACTAAAGCCACTTAAAAATGTGGTCCCTTGGTTACAAGAAATATTCACATGGGAAAGACCAGTAAACACTCTTGCCGTTCTTGCTGCATCGCTAATAATCACCTATATGGAATGGGTTGGAAAGGGAGCTGCAGCATTCTTGGTATGGGTGATAGTAAAGATGCTTGAGGCAAGAGAGAAAAAGCTTAATGAGCAATGCAATGAGATCGTAATCAATAGATCTAACATGGCTTCTGATCAATCTACAATGGATAGCATTGTCTCAGCCCAACATGGATTATACACAGTTCATGAGATGATGCAGATAGCAAACATAGCAATGTTAAAGATATGGTCTATATTTATTTCAAAAGCTGACAAGCATGCAAGAACAGTGATGGTGGCACTGGGTGGATTAGCATTCTTATTAGCAGTGATACCATTCAAATTCTTCCTAATGGGTCTCATTGTGCAAAGTTTCACCATGGCATTTAAGACAAGCAACTCTTCAGGAACTGGGAATAGAAGGTTGAAGGAATGGTGGGACTCAATACCAATAGTCCCTATCCGTGTAGTAGACAATGATGATAAGTCTCCACATGTTAAATAG 2181 0.4127 MATKLKYLSSIAKDVVTRCAQKLDITVEKLVEDFERGRTLDAGNYCKNLVEFCSGKVLSDMCCKLEEEINNGSFGRLSFDIMLAWERPSYYDDNECLEVEAKEKEEKKKPVKTTPEQDDISLFYSDIMPLLVTNEPSVGEDAFVWLGSLVPLAADVTNGRFTFESLTAPTGFQLHFPAYDMFLKEMAKCIRHLQKQAMPTGVELAEDEYILHVEGTASSQRVIRHIGSTSWPGRLTLTNYSLYFETSGVIKYEDALKIDLSKDIEQSVEPSATGPWGAQLFDKGIVIESSELSEGVVLEFPELTSSTRRDHWLALIREIMFLHQFLSKYQIKCRIQTWEMHARTILGIIRLHAAREMLRISPPVPTKFLIFSLYNEIPKGDYVLEELPDVLRKVKTGQPCSANSLLRSMNIAGPVVSDSIVEEVSQADKSVDALDDSPPLESASTQSREEEKKVLAAKATTKELKEEGVAKGTTKELKERSTDNLLVLTPSLECAIKQSREEEKKVLVAKATTEELKEEGVTDSVLVLTELLKPLKNVVPWLQEIFTWERPVNTLAVLAASLIITYMEWVGKGAAAFLVWVIVKMLEAREKKLNEQCNEIVINRSNMASDQSTMDSIVSAQHGLYTVHEMMQIANIAMLKIWSIFISKADKHARTVMVALGGLAFLLAVIPFKFFLMGLIVQSFTMAFKTSNSSGTGNRRLKEWWDSIPIVPIRVVDNDDKSPHVK 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03486 726 Coils Coil 447 467 - -
Vivi6g03486 726 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 4 471 - -
Vivi6g03486 726 MobiDBLite consensus disorder prediction 428 455 - -
Vivi6g03486 726 Pfam Plant protein of unknown function (DUF639) 491 717 IPR006927 -
Vivi6g03486 726 Coils Coil 583 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03486 Vivi-Chr6 127547967 127551840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03486 - - psat:127126618 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03486 6 127547967 127551840 Vivi6g03486 6 127547967 127551840 ECH
Vivi4g00595 4 12838372 12843940 Vivi6g03486 6 127547967 127551840 PCT