Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02315 ATGTCCAACATCCAAGAAGAAGATTCGTCTCCCCCGAGGATACACATTCAGACTCCACCAACAGCGCCAGAGGTGACTGATCGGGAAAAGCCGCCGCCGCAGACCGGAGGAATAGGAGCCATATTGAAGAGGTGGAAGAGGGAAGACTTGATAAAGAGAGGATCGTTGGGATTGAGAGGGATCGCTTTGCTTTTCTCTCTGATTTGTTTCATTGTAATGGCTAGCAACAAACATGGCGATTGGAGGGATTTCGATAAATATGAAGAGTATAGGTATGTGCTGGCAATTGCGATTTTGTCGAGTTTGTACACTGGAGCTCAAGTTTTTCGTCAAATTCACGAACTTTCTACTGGAAAACAATTGATTAAACCAAGTGTGGCAACTATCATTGATTTTTTTGGTGATCAGATAATGGCATATTTTTTGATATCATCAGCATCTTCAGCAATTCCGATGACAAATAGAATGAGGGAAGGTGCAGACAATATATTCACAGACGCTTCATCTACAGCCATTAGCATGTCGATTTTCGCCTTCTTGTGTTTGGCCGCATCTGCTCTCATATCTGGATACAAACTATCAGCTCAGTCCTATATCTGA 600 0.4283 MSNIQEEDSSPPRIHIQTPPTAPEVTDREKPPPQTGGIGAILKRWKREDLIKRGSLGLRGIALLFSLICFIVMASNKHGDWRDFDKYEEYRYVLAIAILSSLYTGAQVFRQIHELSTGKQLIKPSVATIIDFFGDQIMAYFLISSASSAIPMTNRMREGADNIFTDASSTAISMSIFAFLCLAASALISGYKLSAQSYI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02315 199 MobiDBLite consensus disorder prediction 1 15 - -
Vivi6g02315 199 Pfam Casparian strip membrane protein domain 51 181 IPR006702 -
Vivi6g02315 199 PANTHER CASP-LIKE PROTEIN 4A4 27 194 - -
Vivi6g02315 199 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02315 Vivi-Chr6 102104828 102106118 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02315 - - gmx:100818718 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02315 6 102104828 102106118 Vivi6g02315 6 102104828 102106118 ECH
Vivi6g02315 6 102104828 102106118 Vivi5g00442 5 6551515 6552681 PCT