Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00442 ATGATGTTGGATTCTACCAATTCAGAAGTGAAGGTAGACATGAGTCCACCGAGGCCGCCGAGTGGAGTCGGCGACGGAATCCTACAAAGATGGAAGAGGGAGGACTCTCTCAAGAGAGGCTCATTAGGATTGAGAGGAGTTGCTCTATTTTTCTCCTTGGTTTCTTTCCTCCTCATGGCAAGTAATAACCATGGCAAATGGCAACATTTTGACATGTTTCAAGAATACAGGTATTTGCTTGCAGTAACAATATTTTCTAGTTTATACACTGGAGGGCAAGTGTATAGACAAATTCATGAACTTTCAACTGGGAATAATATGTTTAGGCCTACCACTGCAGCTTTGATTGATTTTCTTGGGGATCAAGTGATGGCATATATGTTGATATCATCAGCATCCACAGCAATTCCTGTAACAGATAGAATGAGAGAAGGAGGAGATACTCTATTTACAGACTCATCAGCTGCAACCATTACTATGGCCTTTTTTGCTTTTTTTTTTCTTGCACTATCAGCAATCATATCTGGATACAAATTATCAGCCCAAAGTTAG 552 0.404 MMLDSTNSEVKVDMSPPRPPSGVGDGILQRWKREDSLKRGSLGLRGVALFFSLVSFLLMASNNHGKWQHFDMFQEYRYLLAVTIFSSLYTGGQVYRQIHELSTGNNMFRPTTAALIDFLGDQVMAYMLISSASTAIPVTDRMREGGDTLFTDSSAATITMAFFAFFFLALSAIISGYKLSAQS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00442 183 PANTHER CASP-LIKE PROTEIN 4A4 20 179 - -
Vivi5g00442 183 MobiDBLite consensus disorder prediction 1 25 - -
Vivi5g00442 183 Pfam Casparian strip membrane protein domain 36 167 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00442 Vivi-Chr5 6551515 6552681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00442 - - gmx:100818718 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02315 6 102104828 102106118 Vivi5g00442 5 6551515 6552681 PCT