Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02308 ATGAAAAAAAAGTGCACAATGGCTACCATGGAACCTACCGCAGCGAAGCCTGGCTCATTCTGGAACCTTCTGAAACGGTTACTCCTCTCCGGAGTTTTCATCATCGCCATCCGTTTCGCTTACGTCATCTCCATCGCCGGCGAGTCATGCAACGTCGGTAATTTCTGCTTCTTCTCCCTACCAGAGACTCTCACCATCGCTATTACCGGCAACGATCCTTTCTCCGGTGAGTCTACTCCCGGCGGAGTTCGCGCAAACTCATCGATATCAGAGCTTTATTCCAGCAAAGAGTGGCTCGACAGTGTTCATTTCTACTCGTCGGTTTTTCATGACCTAATATCCGGCGGTTACCTCTCAACGGAGTCGAATTCACTCTGCGTTGAAACGCCGACCGGACGCGATGTTTTTGCTCTGAGAGAAATCGGCGTCCGGAATGCTATCGGAGTCTCGAAGAAATCAGTGAAGCCGCTTGTGAAATCGGGAAGCGGCGAACGAATTCCGTTCGGTGAGAATTACTTTGATTTCGTTTTCTCCGGTGAAGGCTCGTTCGCGAGGTCGGCGAAGCCGGCTGTATTCGCAGCGGAGATTGCTCGGACGCTGAAACCGGGAGGATTCGCGGTATTTCATTTCACAAAACCTAAAGATAGTTATAGTTTCAATTCATTCCTTGATTTGTTTCATTGTTTCAAAGTAGTGAAATTGCATGTTTTAGAAGGGTTTGATTCTTCATTGGCTTATATACATGAAACTGTGTTGAAGAATGAGTGTGTTAATGATGATGTTGCTGGTAAATTCGATAGTGATTATTACTCGAATGAAAAGTGTTATGTTCCGGGGTATAAGAAAGATTTGGTTAGGATTGCTGAGCCATTGATTGAAAAGGAACCATTGAAGCCATGGATTACTTTGAAGAGGAATATAATGAATATAAAGTATCTATCTTCAATGGTTGATATTAGTTTCAAGAATAGGTATTTGTATGTTGATGTTGGAGCTAGAAGCTATGGCTCTAGCATAGGATCTTGGTTTAGGAAACAGTATCCGAAACAGAACAAGACGTTTCATGTGTATGCGATTGAAGCTGACAAGACTTTTCACAAGGAGTATGGGTTGAAGAAAGGGCTTACTTTAATTCCTTATGCGGCTTGGGTGAAGAACCAGACGTTAAGTTTCGAGATTCATCGTAATCCTGGGGAGCATGTTGAGGTTAAAGGAAGAGGGATGGGTAGGATTCAGCCTTTGGAGTCAAGAGGGAAGGAGTTTGAGGGGGAGGTGGAGAAGATACAGGGATTCGATTTTGCGAATTGGTTGAAGAACACTGTTACAAAGAATGATTTTGTTGTGATGAAAATGGATGTAGAGGGTACTGAATTTGATCTGATACCAAGGTTGTTTGAAACCGGGGCAATCTGTTTGATAGATGAGATTTTTCTCGAATGCCATTACAATAGATGGCAGAGATGTTGTCCTGGGGAGAGGAGTTCGAAGTATGAGAAAACATATGATCAATGCTTGGATCTCTTCAATTCTCTTAGACAAAGTGGAATTCTTGTTCATCAATGGTGGTAA 1569 0.4328 MKKKCTMATMEPTAAKPGSFWNLLKRLLLSGVFIIAIRFAYVISIAGESCNVGNFCFFSLPETLTIAITGNDPFSGESTPGGVRANSSISELYSSKEWLDSVHFYSSVFHDLISGGYLSTESNSLCVETPTGRDVFALREIGVRNAIGVSKKSVKPLVKSGSGERIPFGENYFDFVFSGEGSFARSAKPAVFAAEIARTLKPGGFAVFHFTKPKDSYSFNSFLDLFHCFKVVKLHVLEGFDSSLAYIHETVLKNECVNDDVAGKFDSDYYSNEKCYVPGYKKDLVRIAEPLIEKEPLKPWITLKRNIMNIKYLSSMVDISFKNRYLYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHKEYGLKKGLTLIPYAAWVKNQTLSFEIHRNPGEHVEVKGRGMGRIQPLESRGKEFEGEVEKIQGFDFANWLKNTVTKNDFVVMKMDVEGTEFDLIPRLFETGAICLIDEIFLECHYNRWQRCCPGERSSKYEKTYDQCLDLFNSLRQSGILVHQWW 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02308 522 Gene3D Vaccinia Virus protein VP39 143 243 IPR029063 -
Vivi6g02308 522 Pfam Methyltransferase domain 158 208 IPR013216 GO:0008168
Vivi6g02308 522 Pfam Methyltransferase FkbM domain 329 488 IPR006342 -
Vivi6g02308 522 Gene3D Vaccinia Virus protein VP39 310 488 IPR029063 -
Vivi6g02308 522 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 312 480 IPR029063 -
Vivi6g02308 522 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 160 236 IPR029063 -
Vivi6g02308 522 PANTHER METHYLTRANSFERASE 10 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02308 Vivi-Chr6 102025255 102027597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02308 - - gmx:102670512 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02308 6 102025255 102027597 Vivi6g02308 6 102025255 102027597 ECH
Vivi6g02308 6 102025255 102027597 Vivi5g00438 5 6523312 6525408 PCT