Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00438 ATGGACCCTACCGTAGGCAAGCATGGCTCCCTTCGGAACGTTCTGGTTCGGTTACTTCTCTTCGGCGTTTTCGTCGTTCTTTTCCGATTTGCTTACGTCATCACCATCGCCGGTGAAAACTGCAACGTTGGAGATTTCTGTTTCTTTTCATCTCCGGCGAAAATCAACGCCGCCGTCGCCGGATCTGGCTCCGGAGCACTCTCCGTCCGATCATCAGCCGAATTATCCACGCCGGAGCATGAATCAAGCAAGGATTGGATCACCGGCGTTCGGTTCTACTCGTCGATTTTCCAGAACATGATCGCCACGGGCGATCTTTCGCGGAACGCGAAGTCGCTCTGCGTCGATACACCGACCGGAAGGGATGTGTACGCGTTGAAGGAGATCGGTGTTGAAGATTCCGTTGGAATTGCGAAGAAGGCGGTGAAGTCGTTGGTGAAATCCGGTGAAGGTCACCGGATTCCGTTTGGTAATAGTACCTTTGATTTTGTGTTCTCCGGTGAGGGAGGTTTGGAGAGATCGATAAAACCGTCGGAATTCGCGGCTGAGATTGCGAGGACGCTGAAACCCGAAGGGTTTGCAGTGTTCCATGTAAATGCTAAAGACTCATACAGTTACAATTCATTTGTTGATTTGTTTAAATTTTGTTGTGAAGTGGTGAAATTCCATGACATTCATGGTTTCGATACTTCACCGGTGATAAGAGAAATCTTCGTGAAGAAAACCGGTTATAGAAAAACTGATTCTGAATTTGATTTGAATAGGAGTCAGAATCAGAAATGTTTGGTTTCAGATTATAAGAGAGAATTGGTTAAGAATGCTGAGGAATTGATTGAGGAAGAACCATTGAAGCCATGGATAACCCTAAAGAAGAATGTGAAGAACATAAAGTATGCACCATCAATGGTTGATATAAGCTTTAAGAATAGGTATGTGTATGTTGATGTTGGGGCTCGAAGCTATGGTTCGAGTATTGGAAGCTGGTTTAAGAAACAGTATCCGAAACAGAATAAGACCTTTCATGTTTACGCAATCGAGGCTGATAAAACTTTTCATCAAGAGTATGCGACGAAGAAAGGGATAACTCTGTTGCCTTATGCTGCATGGGTTAGGAACGAGAGTTTGGTTTTCGAGATCAACAATGACCCGGGTGATAAGAAGAAAGAGAAAGCAGGGAGAGGAATGGGAAGGATTCAGCCCTTGGATTCACAAGGTGGCGCGGGCGGTGGTGTTCAGACGACGCAAGGGTTTGATTTTGCGGAATGGTTGAAGAAAACGGTTACGATGAATGATTTCGTCGTGATGAAAATGGACGTGGAAGGTACGGAATTCGATTTGATTCCCAGATTGTTTGAAACCGGAGCGATTTGTTTGATTGATGAAATTTTTCTTGAGTGTCATTACAATAGATGGCAGAGATGTTGTCCGGGACAAAGAAGTCCGAAGTATGAGAAAACATATGGTCAATGTTTGCAGCTTTTCAATTCTCTTAGAGAAAGTGGTGTTCTTGTTCATCAATGGTTTTAG 1527 0.444 MDPTVGKHGSLRNVLVRLLLFGVFVVLFRFAYVITIAGENCNVGDFCFFSSPAKINAAVAGSGSGALSVRSSAELSTPEHESSKDWITGVRFYSSIFQNMIATGDLSRNAKSLCVDTPTGRDVYALKEIGVEDSVGIAKKAVKSLVKSGEGHRIPFGNSTFDFVFSGEGGLERSIKPSEFAAEIARTLKPEGFAVFHVNAKDSYSYNSFVDLFKFCCEVVKFHDIHGFDTSPVIREIFVKKTGYRKTDSEFDLNRSQNQKCLVSDYKRELVKNAEELIEEEPLKPWITLKKNVKNIKYAPSMVDISFKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFHVYAIEADKTFHQEYATKKGITLLPYAAWVRNESLVFEINNDPGDKKKEKAGRGMGRIQPLDSQGGAGGGVQTTQGFDFAEWLKKTVTMNDFVVMKMDVEGTEFDLIPRLFETGAICLIDEIFLECHYNRWQRCCPGQRSPKYEKTYGQCLQLFNSLRESGVLVHQWF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00438 508 PANTHER METHYLTRANSFERASE 1 508 - -
Vivi5g00438 508 Pfam Methyltransferase FkbM domain 315 473 IPR006342 -
Vivi5g00438 508 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 297 453 IPR029063 -
Vivi5g00438 508 Pfam Methyltransferase domain 146 196 IPR013216 GO:0008168
Vivi5g00438 508 Gene3D Vaccinia Virus protein VP39 295 472 IPR029063 -
Vivi5g00438 508 Gene3D Vaccinia Virus protein VP39 102 280 IPR029063 -
Vivi5g00438 508 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00438 Vivi-Chr5 6523312 6525408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00438 - - gmx:121174389 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02308 6 102025255 102027597 Vivi5g00438 5 6523312 6525408 PCT