Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02303 ATGGCGAAAAACCATCTGGGTCTCTCTCAATTCCCTCATTCTTCATCAATGGACCACTCTTCATCTTCTACATCCATCATCACTAGTTCTACACCCTTCTTAGAAACTCCAAAACATCCTTCACCTAAACCACACAAAAAAACCATAGTAACAACCTTAAGGGAAGCTGCAAACTTCACTTCCTCTTCCTTCAAAGAAGATACCTATTTTGTTTCCAGCCTCAAATCCTCGGAGAAGAAAGCATTACAAGAGTTGAAGAAGAAGCTCTCAGCTTCAAAGGAAATCAACAAAAGCAATGCTTCCATGTGGGGTGTTTCCTTGATCAATGGCCATGATGCTGCTTCTGCTGATGTGATTCTCTTGAAGTTTCTTAGAGCTAGAGACTTTAGAGTCAGTGATGCTTACACCATGCTTGTGAGGTGTCTTGCATGGAGAAAAGAGTTTGGTGCTGAGAATATTCTCGATGAGGAACTGGGATTCAAGGAGCTTGAAGATGTTGTGACTTACACTCATGGTTATGATAGAAAAGGACATCCTGTGTGTTACAATCATTATGTTGTGTTTAAGGATAAGGATTTGTATGAGAGGATTTTTGGTGATGGAGAGAAGCTGAAGAGGTTTTTGAGATGGAGGGTTCAGGTTCTTGAGAGAGGAATCAAGCTCTTGGATTTTAAGCCTGGTGGTGTTAACTCTTTGATTCAGGTTACTGATCTTAAGGACATGCCTAGGAAAGAACTTAGGACTGTTTCTAATGAGATTCTCACATTGTTTCAAGATAATTATCCTGAAATGGTTGCTCATAAGATATTCATCAATGTGCCATGGTATTTTAGCATGTTGTATGCAATTTACTGTCCATTTCTGACTCAAAGAACTAAGAGCAAGTTTGTGATATCTAAGGAAGGAAATGCAACAGAAACACTCTACAAATTCATAAGGCCTGAGAATATTCCTGTACAATATGGAGGATTGAGTCGACCTAGTGATTTTCGAAATGGTCCTCCAAAACCAGCTTCTGAGTTCACTGTTAAAGGTGGAGAGAAAGTGAACATACAAATAGAAGGAATTGAGAGTGGTGCAACAATCAAGTGGGAGATTGTGGTTGGAGGCTGGGAAGTACAATACAGTGCTGAATTTGTGCCAAATGCAGAAAGAAGCTACACTATAGCAGTTGATAAGGCAAGGAAAGTTGAAGCATCAGAGGAAGTAATTGAGAGTTCATTTACATCAAAAGAAGGGGGCATAATAGTACTCACAGTTGATAACTCTGGTTCAAGGAAGAAAAAAGTTGGTGCTTATCGGTATGTTGTCCCCAAATGCAACAACAATAATACAGCTTCTGATAATATGCAATTAATTGTGTATGAGTAA 1371 0.3924 MAKNHLGLSQFPHSSSMDHSSSSTSIITSSTPFLETPKHPSPKPHKKTIVTTLREAANFTSSSFKEDTYFVSSLKSSEKKALQELKKKLSASKEINKSNASMWGVSLINGHDAASADVILLKFLRARDFRVSDAYTMLVRCLAWRKEFGAENILDEELGFKELEDVVTYTHGYDRKGHPVCYNHYVVFKDKDLYERIFGDGEKLKRFLRWRVQVLERGIKLLDFKPGGVNSLIQVTDLKDMPRKELRTVSNEILTLFQDNYPEMVAHKIFINVPWYFSMLYAIYCPFLTQRTKSKFVISKEGNATETLYKFIRPENIPVQYGGLSRPSDFRNGPPKPASEFTVKGGEKVNIQIEGIESGATIKWEIVVGGWEVQYSAEFVPNAERSYTIAVDKARKVEASEEVIESSFTSKEGGIIVLTVDNSGSRKKKVGAYRYVVPKCNNNNTASDNMQLIVYE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02303 456 CDD SEC14 165 324 IPR001251 -
Vivi6g02303 456 MobiDBLite consensus disorder prediction 8 36 - -
Vivi6g02303 456 SUPERFAMILY CRAL/TRIO N-terminal domain 71 157 IPR036273 -
Vivi6g02303 456 PANTHER PATELLIN-1 46 438 IPR044834 GO:0008289
Vivi6g02303 456 Pfam CRAL/TRIO domain 165 323 IPR001251 -
Vivi6g02303 456 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 340 430 IPR036598 -
Vivi6g02303 456 Gene3D - 155 334 IPR036865 -
Vivi6g02303 456 ProSiteProfiles GOLD domain profile. 305 456 IPR009038 -
Vivi6g02303 456 Gene3D GOLD domain 335 436 - -
Vivi6g02303 456 MobiDBLite consensus disorder prediction 1 46 - -
Vivi6g02303 456 SMART CRAL_TRIO_N_2 116 141 IPR011074 -
Vivi6g02303 456 Pfam CRAL/TRIO, N-terminal domain 81 139 IPR011074 -
Vivi6g02303 456 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 156 329 IPR001251 -
Vivi6g02303 456 SUPERFAMILY CRAL/TRIO domain 161 326 IPR036865 -
Vivi6g02303 456 Gene3D - 71 147 - -
Vivi6g02303 456 SMART sec14_4 162 326 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02303 Vivi-Chr6 101925252 101927419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02303 120 318 Acyl Lipid Metabolism Gene Families AT1G55840 26.852 1.99e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02303 - - vvo:131611974 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02303 6 101925252 101927419 Vivi6g02303 6 101925252 101927419 ECH
Vivi6g02303 6 101925252 101927419 Vivi5g00435 5 6474033 6477062 PCT