Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02295 ATGGGGAATTGGAAGAAGATACAGATTCCTATTCCTAGTTCAAGTGGGAATCAGTTTTACACTCCTGGTCATAATCTATCTGTGTTTGGAAGAAATTTGACTAAGGATCAACTTGGTGGTGTTATATTTGGTTGCAAGAATTCCACTATCAAAGAATGCTTAACCAAACAACTCTTTGGATTACCGGCTATGCATTTCTCTTATGTGAAGCATATTCAACCTGGGTTGCCTCTGTTTTTGTTTAACTATACTGATAGGATGCTTCATGGGATTTTCGAAGCGGCTGGTAACGGAAGGATGAATATTGATCGTTATGGATGGACTGCTGATGGCAAAGAAATGACACAGTTTCCTGCTCAGGTGCAAATTCGAGTTCAATTGCATTGCCGGCCATTGTCCGAAGATAAATTTAGACATGCAATTGCTGATAACTACTACCACCATAACCATTTCTGGTTTGAGCTGGATCACGGACAAACAAGCCAATTGATTGCCTTACTACAACCCTTGGCAATTGCCCCCGCCGATTCTGTTCCACAGAATATGAATCGAGTAACTATACCACGAAGTCTTCCGTGGCACGATCCTTCATGGAAAGCTAAAACATTTAAAATGCCTGAATCAGAGTTCGAGCAGTATCACTCTTCCCGCTCAAGTATGATATCAGGTTCCAATGAGAGTGATTTGTTAGATGAATGCTTTCAGCCTTTGGATACTTCATCCGTTGATAAGGTGGAAGCAACACAAAATGAGACGAACGCCATATGGATGAAACTAAAGGAAATTTCAGTTGCTCATCCAAATCAAAATCTATCTTGGGAAAATAATGTAAATGATGCCCCTTATGCGAATGAGAATTGGTCCGAAGGAAAGCATTCTGTTGAGCAGGATGAGAATCCTAGTTCTCCATTAGAGAAGGAGGAGAATCCTTGTTCTCCATCCGAGAAGGAGTATACTACCTGTTCTTCATTTGAGAAGGAGGAGAATACTGGTTCTCCACTAAAGCATCAATACAACATAGCTCAGTTGGTGCAAAAGATCCAAGAACTGACAGATTTCAAAAAAGCTCAAGTTGAAAAGACTAACTACCTGGAGCAGAAGCTGATAAAGGCAGAATTGGAAATTCAGCTTCTAAAAGACCGTTTTGTGCTGTTTGAATCTACGCGTGATACTTCTCAGACACATGTTGAGGAGACAGTAGTCAATCCATCTGCTGAGCTGCATTTAGATGCCAAAGATTCGTTCTTTTTAATAGGTGGCTCTGATGGAGAATCATCATTAGCAGCCATGGATATGTATTGTACTTCTCAGAATGTGATCAAATCTCTCAAGCCTATGAACCATCTCCGATCACATGCTTCAGTTGTAGAGTTGAATGGCGAGATTTATGTTTTTGGTGGTGGAAATGATCATGATTGGTTTGACTCAGTTGAATCATACAATCCAAGTTATGACAACTGGACCTTGTGTCCCTCCTTGAACCAAAAGAAAGGAAGCTTGTCCGGTGCTGCTTTGGAAGGAAAAATATTTGCTGTTGGAGGTGGCAACGGCGTTGAGTGCTTTTCAGATGTTGAGATGCTTGATTTAGATGTTGGGCGGTGGATCCCCACACGTTCAATGCTTAACAAGAGATTCGCTCTTGCTGCAGTAGAACTCAATGGTGCAATTTACGCTACTGGTGGATTTGATGGAAATTTCTATTTAAACTCTGTCGAAAGATTTGATCCCAGGGAACATTCTTGGTCCAAAATGCCAAACATGAATACAAGGCGTGGCTGTCACTCAATAGTTGCTCTAAATGAGAAATTGTATGTGTTAGGCGGCTTTGATGGTGAAACAATGGTTCCAAGTGTTGAAGTCTTTGATCCTCGTCTCGAGACATGGATGATGGAGGAAACAACAATGAATCATTCTAGGGGGTATTTTGCTGCTGCAGTTGTCAAAGATTCCATCTATGCGATTGGTGGTGTTAATGATTGTCAAACTATTGTAAATACTGTTGAGAGTTATAAAGAAGGTGAAGGATGGAAGGAAATTTACACATCAGCAAATGTCAAAAGGTGTTTCATGTCAGCCATTGCTCTGGCATGA 2091 0.4089 MGNWKKIQIPIPSSSGNQFYTPGHNLSVFGRNLTKDQLGGVIFGCKNSTIKECLTKQLFGLPAMHFSYVKHIQPGLPLFLFNYTDRMLHGIFEAAGNGRMNIDRYGWTADGKEMTQFPAQVQIRVQLHCRPLSEDKFRHAIADNYYHHNHFWFELDHGQTSQLIALLQPLAIAPADSVPQNMNRVTIPRSLPWHDPSWKAKTFKMPESEFEQYHSSRSSMISGSNESDLLDECFQPLDTSSVDKVEATQNETNAIWMKLKEISVAHPNQNLSWENNVNDAPYANENWSEGKHSVEQDENPSSPLEKEENPCSPSEKEYTTCSSFEKEENTGSPLKHQYNIAQLVQKIQELTDFKKAQVEKTNYLEQKLIKAELEIQLLKDRFVLFESTRDTSQTHVEETVVNPSAELHLDAKDSFFLIGGSDGESSLAAMDMYCTSQNVIKSLKPMNHLRSHASVVELNGEIYVFGGGNDHDWFDSVESYNPSYDNWTLCPSLNQKKGSLSGAALEGKIFAVGGGNGVECFSDVEMLDLDVGRWIPTRSMLNKRFALAAVELNGAIYATGGFDGNFYLNSVERFDPREHSWSKMPNMNTRRGCHSIVALNEKLYVLGGFDGETMVPSVEVFDPRLETWMMEETTMNHSRGYFAAAVVKDSIYAIGGVNDCQTIVNTVESYKEGEGWKEIYTSANVKRCFMSAIALA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02295 696 MobiDBLite consensus disorder prediction 271 332 - -
Vivi6g02295 696 PANTHER - 29 693 IPR044832 GO:0034976
Vivi6g02295 696 SMART kelc_smart 650 696 IPR006652 GO:0005515
Vivi6g02295 696 SMART kelc_smart 508 554 IPR006652 GO:0005515
Vivi6g02295 696 SMART kelc_smart 602 649 IPR006652 GO:0005515
Vivi6g02295 696 SMART kelc_smart 461 507 IPR006652 GO:0005515
Vivi6g02295 696 SMART kelc_smart 414 460 IPR006652 GO:0005515
Vivi6g02295 696 SMART kelc_smart 555 601 IPR006652 GO:0005515
Vivi6g02295 696 MobiDBLite consensus disorder prediction 314 332 - -
Vivi6g02295 696 Pfam Kelch motif 590 629 IPR006652 GO:0005515
Vivi6g02295 696 Pfam Kelch motif 547 588 IPR006652 GO:0005515
Vivi6g02295 696 Pfam Kelch motif 450 494 IPR006652 GO:0005515
Vivi6g02295 696 Pfam Kelch motif 638 670 IPR006652 GO:0005515
Vivi6g02295 696 Pfam Kelch motif 503 540 IPR006652 GO:0005515
Vivi6g02295 696 ProSiteProfiles DCD domain profile. 36 169 IPR013989 -
Vivi6g02295 696 Gene3D - 395 542 IPR015915 GO:0005515
Vivi6g02295 696 SUPERFAMILY Kelch motif 413 693 IPR015915 GO:0005515
Vivi6g02295 696 Coils Coil 361 381 - -
Vivi6g02295 696 Gene3D - 543 696 IPR015915 GO:0005515
Vivi6g02295 696 SMART dcd 36 169 IPR013989 -
Vivi6g02295 696 Pfam Development and cell death domain 39 166 IPR013989 -
Vivi6g02295 696 MobiDBLite consensus disorder prediction 290 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02295 Vivi-Chr6 101635526 101642809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02295 550 655 EF-hand Containing Proteins AT4G39560 30.556 7.42e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02295 - - mtr:11405987 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02295 6 101635526 101642809 Vivi5g00450 5 6811970 6814834 PCT