Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00450 ATGAGGACAGACAGGAAGATACAAACTTTTAATGGCAAAAGTACTTTACCTGGTAGGAATTTGATGAAGCATCAACTTGGTGGGGTCATATTTGGATGCACAAGACATACAATGAAAGAATGTTTATCTAAGCAACTATTTGGCTTACCAGCTCAACACTTTTCATATGTGGAAAATATTAATCCAAAGATGCCTTTATTTCTTTTCAACTATAGTGATAGGAAGCTTCATGGAGTTTTTGAGGCAACTAGCAATGGAAAAATGTTTATAGACCCTTATGCATGGATTAGTGATGATTATACTGATGAAACACAATATCCTGCACAGGTAAAAGTTCGTGTTCAAGTTCAGTGTCATCCATTATTGGAAGATAAATTTGGACCAATAATTAAAGAGAATTACTATCTCAATAATCATTTTTGGTTTGAACTAGACCATAGACAAACAAGCAAGTTAATGCATTTATTTCTATCTCCGACCATAGTTACTAAAACACCAATATCACATTCTAATTCTAACGGCAAAACTGAATATTCATCTCCTCCACGCAAAATCTTAAAGAAAGATGAATTCAACCGACCATTACGTACTCACCCAATTAAAAAGGAGATAAAGCATGATGAAAAAAATCGTGTATACAAGAAACTATTAGAATTTGCTCTTAAAAAGAAAAATCAAGGTTTATCTTTGATAGACAATGTTAGTGAAGCTCCTAATGAGAATGTTAGTGAAGCTCCTAATGAGAGCGAGACAAAGGATTACAGAGACGCATCATTAAGTTTAAAAAAGAAGGAAGAAAATTGTCGTTCTTCATTTGAGAATCTATATACTATAGTACAGTCGGTGCAACAACGAGTTAAAGAAAGGAAAGCTTTTCAAAAAACCCAGTCGTCGGAGAATGGTGATCTAAAACAAAAGCAGGTTTCCTTTGAAATTCAACATGTCGAAGATGAAGATATTATGTCTAGATTTACAAATGTGGAGAAGACGATTATCCAATTTTTATTGTCCAAGAATGCAACCAAATCTTTTCAACCATTGAACTTTGTAGGTATATACACTACACAAGTACGATTGAAAGTTGCTAGTACTATAAATGGACATAAATGCTTTACAAATATTGAGATCTTTAATTTAGATTATGGAAGGTGGATCTCTATAAATTCAAATTCAGATAAGAAATTTGATCTTGCTGGAATGGAACTCAATGATTCACTTCATTTTAATGGTGGATATAATGGATTTGACTATTTGAAGTATACTATGCATGGCATTGATGAATGCACAAGTGTTCCATATATGGATCTCTTTGATCCATGTTTTGAGGCAAGGATGAAATTGATGAATTGTCTTGAGGATTTTTCTGATGCCAAATATTTTAAGAAGTCTATGAGATTGAGGGAGTCTAAGTTTTTGAAAACTTTTTAA 1428 0.3277 MRTDRKIQTFNGKSTLPGRNLMKHQLGGVIFGCTRHTMKECLSKQLFGLPAQHFSYVENINPKMPLFLFNYSDRKLHGVFEATSNGKMFIDPYAWISDDYTDETQYPAQVKVRVQVQCHPLLEDKFGPIIKENYYLNNHFWFELDHRQTSKLMHLFLSPTIVTKTPISHSNSNGKTEYSSPPRKILKKDEFNRPLRTHPIKKEIKHDEKNRVYKKLLEFALKKKNQGLSLIDNVSEAPNENVSEAPNESETKDYRDASLSLKKKEENCRSSFENLYTIVQSVQQRVKERKAFQKTQSSENGDLKQKQVSFEIQHVEDEDIMSRFTNVEKTIIQFLLSKNATKSFQPLNFVGIYTTQVRLKVASTINGHKCFTNIEIFNLDYGRWISINSNSDKKFDLAGMELNDSLHFNGGYNGFDYLKYTMHGIDECTSVPYMDLFDPCFEARMKLMNCLEDFSDAKYFKKSMRLRESKFLKTF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00450 475 ProSiteProfiles DCD domain profile. 24 158 IPR013989 -
Vivi5g00450 475 SMART dcd 24 158 IPR013989 -
Vivi5g00450 475 MobiDBLite consensus disorder prediction 232 256 - -
Vivi5g00450 475 Pfam Development and cell death domain 27 156 IPR013989 -
Vivi5g00450 475 PANTHER - 359 435 IPR044832 GO:0034976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00450 Vivi-Chr5 6811970 6814834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00450 - - psat:127104843 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02295 6 101635526 101642809 Vivi5g00450 5 6811970 6814834 PCT