Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02146 ATGAACACTACATCTCTCTCCATAAACCCTTCTCTTCCTTCATCTTCATCACGTTCTTCACACCCTTCTATAACCTCTCTTTCATTTCAACGTTTTTCACCATTACGACCAAAATCCATTACTCTTTCTTGTACAAAAACTCAATTACGCTATTTTCAAGGGCTAAAAACTGTAAAGGGTAGAAAAAGGTTGGTGCTTGAAGCTACAAACATGGATAAAACAGAAGTTGATTCTCATGACGAAGAGGATAAGGAAGAGGGTGGTTCTTCTAGTTTGGCTGACTCTGAAAATAAGAGGAATTTGAAGCCTCGGAGAATTGCTCTCTTTGTTGAACCTTCTCCGTTTGCATATGTCTCAGGATACAAAAACCGGTTTCAGAATTTTATCAAATGCCTTCGTGAAATGGGAGATGAGGTGATGGTTGTGACAACACATAAAGGAGTGCCTCGGGAATTTTACGGAGCCAAAGTAATAGGATCTTGGAGCTTTCCGCTCCCTTGGTACCAGAACGTCCCCCTCTCTTTGGCACTTAGTCCAAGAATAATTTCAGAGGTAGCTCGGTTTAAGCCTGACATAATACATGCATCATCACCAGGCATAATGGTTTTTGGTGCTCTTATCATTGCTAAACTTTTGTGTGTTCCAATTGTCATGTCTTATCATACCCATGTACCAGTGTACATTCCAAGATATACCTTTAGTTGGCTTGTGATACCTATGTGGTGGGTCATAAAATTTCTTCACCGAGCCGCTGACCTAACTCTGGTACCATCTGTTGCCATTGCGAGGGATCTTCAAGCGGCAAGAGTAACAGCAGCTAACAAGATTCGTCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTCGATACCGTTCGCATGAAATGCGATTAAGGCTAAGCAACGGTGAACCTGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTAGAAAAGAGTTTAGATTTTCTAAAAGGGGTCATGGATAAGCTTCCCGAAGCTCGAATTGCTTTCGTTGGAGATGGACCATACAGGGTGGAGCTAGAAAAATTGTTTGAAGAAATGCCTGTGGTATTCACAGGAATGTTAGGAGGCGAAGAACTCTCTCAAGCATACGCTAGTGGAGATGTATTCGTCATGCCTTCAGAGTCCGAAACACTTGGATTCGTTGTTTTAGAAGCCATGTCTTCAGGGATACCTGTGGTGGCCGCACGTGCCGGAGGCATTCCCGATATAATCCCTGCAGATCAAGAAGGTAAAACCGGCTATCTCTACAATCCAGGGGATCTTGAAGATTGCTTGAATAAATTGAAGCCTCTTTTGTTCGATAAAGAGTTGAGAGAAACCATAGGAAAAGCGGCCCGTGATGAGATGGAGAAATTTGATTGGAAGGCAGCCACGCGAAAGGTTCGCAATGAGCAATATAATGCTGCGATTTGGTTTTGGCGCAAGAAAAGGGCAGTGCTATTTAGACCCTTACAATGGATTACTAAACGTGTTTTCCGATCGCCACAAGTCAATTATAGATAA 1536 0.4264 MNTTSLSINPSLPSSSSRSSHPSITSLSFQRFSPLRPKSITLSCTKTQLRYFQGLKTVKGRKRLVLEATNMDKTEVDSHDEEDKEEGGSSSLADSENKRNLKPRRIALFVEPSPFAYVSGYKNRFQNFIKCLREMGDEVMVVTTHKGVPREFYGAKVIGSWSFPLPWYQNVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVIPMWWVIKFLHRAADLTLVPSVAIARDLQAARVTAANKIRLWNKGVDSESFHPRYRSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKGVMDKLPEARIAFVGDGPYRVELEKLFEEMPVVFTGMLGGEELSQAYASGDVFVMPSESETLGFVVLEAMSSGIPVVAARAGGIPDIIPADQEGKTGYLYNPGDLEDCLNKLKPLLFDKELRETIGKAARDEMEKFDWKAATRKVRNEQYNAAIWFWRKKRAVLFRPLQWITKRVFRSPQVNYR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02146 511 CDD GT4-like 105 477 - -
Vivi6g02146 511 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 101 488 - -
Vivi6g02146 511 Pfam Glycosyltransferase Family 4 123 286 IPR028098 -
Vivi6g02146 511 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 106 473 - -
Vivi6g02146 511 MobiDBLite consensus disorder prediction 70 97 - -
Vivi6g02146 511 FunFam sulfoquinovosyl transferase SQD2 301 463 - -
Vivi6g02146 511 Gene3D Glycogen Phosphorylase B; 120 467 - -
Vivi6g02146 511 FunFam Sulfoquinovosyl transferase SQD2 105 300 - -
Vivi6g02146 511 Gene3D Glycogen Phosphorylase B; 283 463 - -
Vivi6g02146 511 MobiDBLite consensus disorder prediction 1 24 - -
Vivi6g02146 511 Pfam Glycosyl transferases group 1 306 458 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02146 Vivi-Chr6 96146828 96151336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02146 26 419 Glycosyltransferase AT5G01220 73.350 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02146 K06119 - gmx:100807850 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02146 6 96146828 96151336 Vivi6g02146 6 96146828 96151336 ECH
Vivi6g02146 6 96146828 96151336 Vivi5g00556 5 9237617 9242110 PCT