Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02032 ATGGATACTACTCCCACCAAACAACAACACCAACAACTAGAACAACAAAAGCAACAACAAAATCTTAAACATTGTACCTCATTCTTCTGTCTCAAAACCTCCACAAACCCAAACCCATTTTCTATTCTTCTTTTCTGGCTCTCCAAATCCCTCAAAACTTTCTGTTTCAGACTTCATCTCTCACACTCCAAAGGGTTTTGTTTCAAGAAGATTCAGTTTCATCATCATGGTGTTATGATTAACTCCACTCTCATAACAATGGAGGGTTTGAGTTTATCTGAAAATGTGGGTGGTTGTAAAAAAGGAACCTTTTCTGATTTGATTGAGGAAAAGGGTTGTTGTGAGAGTAGTTCAAGCTCTGAGCTTTTGTCATCTGAGAATGTTGGTAATGAAGAAGAACATAGTCAGAGTAGTAGTTGTACTGAGGAAGATTCATCTTCACCACCTTCATGTAAAAGTCCTCAAGGAAGTGAAGATGGGAAGAAGAAGCATTTGGTGGAAAAGGAATTTGTGAAACAGGTTTCAGCATTACCAGAAATTGAGATGATGAAGGAGAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTTGTGGAAATGGGGTCCCTACAGCATTGGCTATCTCAAATGCAATAACTAATCTATGTGCTACCCTCTTTGGGCAACTTTGGAGATTAGAGCCTTTGCGTTCGGAGAAGAAAGCAATGTGGCGAAGAGAGATGGAATGGCTTCTTTCGGTTAGTGATCATATAGTCGAATTAACACCGAATTGGCAGACATATCCTGATGGAAGCAAGCTCGAGGTCATGACTTGTCGACCACGCTCGGATCTGTATGTGAATCTTCCAGCTCTGCGCAAATTAGATAACATGCTTCTTGAAATTCAAGATAGTTTTGTTGATACCGAGTTCTGGTATGTAGACCAAGGTGTTATAGCTCCAGATGCGGGTAATAGTCCGTCGTCGTTTAGGCAAGCGCTTCAGCGACAAGAAGAGAAATGGTGGCTTCCGGTTCCCCGGGTTCCTTCTTGTGGACTACACGAGAATTCAAGAAAGCAATTGCAGCACAAGCGCGATTGCACCAGCCAAATACTAAAAGCGGCAATGGCTATTAACAGTATTACTTTAGCCGAAATGGACATTCCCGAGTCTTACTTAGAGTCTCTTCCAAAGAATGCTAGAATCAGCTTGGGGGATGTTATTCATCGATACATCACGTCGGATCATTTTTCTCCCGAGTGTTTGCTTGCTTGCCTCGATCTATCTTCTGAACATCAAGCCATAGAGATCGCAAACCGAGCAGAAGCTACCATGTATATATGGCGTAAAAAGACGAACTCAAAGCCTGCTAGTGTCAGTGGAAGATCAAGTTCAAGAACATCATGGGAAATGGTCAAGGATCTAATGGTTGATGCAGACAAACGGGAGTTGTTCGCCGATAGAGCAGAAACGCTACTACTTTCCTTGAAGCAGCGTTTTCCCGGTCTCCCTCAAACGGCTTTGGATATGAGCAAAATCCAATACAACAAGGATGTCGGAAAAGCCATACTAGAGAGCTATTCACGAGTCCTCGAGAGTCTTGCATTTAACATGGTGTCACGAATCGACGACGTCCTCTACGTAGACGACTTAACAAAAAACTCCGATCAATTCTCATCTCACTCAAAAGCCGGTGTAATTACTCGCAAGAGTATTTCACTTCCATACTCGGCGCCTGTCCCAACGACTCCATACAAATCAGCTTTCGGAACACCAACACGCTCTCCCGCACACGCGATTAGTCCTTCCAAGGGAGGAAAATCTCCAGTCCTCAATAATGGGAGCAAAACTCCTCAGAGAGGTGTGGGGGTGAAGAAATCATTGACTGATTTTCTTAGCATTGATGCAAAAGGGAGTAGTTCAAATGAGAAAGAAGTTTCAGAATCAAAAACAGTTGATGAAGTGGCAGCTTTTGATTCCAGTGATGTTAAATAG 1977 0.4264 MDTTPTKQQHQQLEQQKQQQNLKHCTSFFCLKTSTNPNPFSILLFWLSKSLKTFCFRLHLSHSKGFCFKKIQFHHHGVMINSTLITMEGLSLSENVGGCKKGTFSDLIEEKGCCESSSSSELLSSENVGNEEEHSQSSSCTEEDSSSPPSCKSPQGSEDGKKKHLVEKEFVKQVSALPEIEMMKERFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREMEWLLSVSDHIVELTPNWQTYPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEIQDSFVDTEFWYVDQGVIAPDAGNSPSSFRQALQRQEEKWWLPVPRVPSCGLHENSRKQLQHKRDCTSQILKAAMAINSITLAEMDIPESYLESLPKNARISLGDVIHRYITSDHFSPECLLACLDLSSEHQAIEIANRAEATMYIWRKKTNSKPASVSGRSSSRTSWEMVKDLMVDADKRELFADRAETLLLSLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRVLESLAFNMVSRIDDVLYVDDLTKNSDQFSSHSKAGVITRKSISLPYSAPVPTTPYKSAFGTPTRSPAHAISPSKGGKSPVLNNGSKTPQRGVGVKKSLTDFLSIDAKGSSSNEKEVSESKTVDEVAAFDSSDVK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02032 658 FunFam Rop guanine nucleotide exchange factor 1 171 412 - -
Vivi6g02032 658 Gene3D PRONE domain, subdomain 1 171 315 - -
Vivi6g02032 658 MobiDBLite consensus disorder prediction 635 658 - -
Vivi6g02032 658 MobiDBLite consensus disorder prediction 600 616 - -
Vivi6g02032 658 Gene3D PRONE domain, subdomain 1 326 545 - -
Vivi6g02032 658 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 109 603 IPR038937 GO:0005085
Vivi6g02032 658 MobiDBLite consensus disorder prediction 579 618 - -
Vivi6g02032 658 FunFam Rop guanine nucleotide exchange factor 7 381 509 - -
Vivi6g02032 658 ProSiteProfiles PRONE domain profile. 170 553 IPR005512 GO:0005085
Vivi6g02032 658 FunFam Rop guanine nucleotide exchange factor 14 413 552 - -
Vivi6g02032 658 Gene3D PRONE domain, subdomain 2 381 509 - -
Vivi6g02032 658 MobiDBLite consensus disorder prediction 631 658 - -
Vivi6g02032 658 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 179 547 IPR005512 GO:0005085
Vivi6g02032 658 MobiDBLite consensus disorder prediction 120 164 - -
Vivi6g02032 658 MobiDBLite consensus disorder prediction 120 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02032 Vivi-Chr6 91523012 91525946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02032 - - gmx:100800673 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02032 6 91523012 91525946 Vivi6g02032 6 91523012 91525946 ECH
Vivi6g02032 6 91523012 91525946 Vivi5g01223 5 32140727 32143850 PCT