Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01931 ATGGCTGAATCAAAGTTGAGCAGCGTGAAGGATAAAAGATGGTCATTGGAGGGTATGATTGCATTAGTGACGGGAGGAACCCGTGGCATTGGGTACGCAATTGTTGAAGAGTTAGCGGAATTTGGAGCAGCAGTGCATATATGTTCACGTAATGAAGATGATATTAACAAATGTTTGGAAGAGTGGAAAAGCAAAGGATTTAATGTAACTGGATCAGTATTATGTGATATACTAAGTCATGAACAACGCAAGACATTAATGGAAAATGTTTCTTCCATCTTTCATGGAAAGCTCAATATTCTAGTCAACAATGCTGCAAAACCTTCAATGAAGAAAATATTAGATAATACTGAAGAGGATTTAACAAGTATAGTTGGTACCAATTTTGTGGCTGGTTACAATTTGTGTCAACTTGCACATCCACTTCTAAAGGAGTCTGGATATGGAAGCATAGTTTTTACTTCATCCATTGCTGGTTTAAGAGCTATTCCCGTTTTATCTGTTTATGCATCCACAAAAGGAGCGGTGAATATATTCACTAAGAACTTAGCATTAGAATGGGCAAAGGATAATATTCGTGCAAATGCTGTTGCACCTGGACCTGTCAAGACTGAACTTTTGGGATCAATAATGGTATGCATTTGTCCATGGGGTGGAGCCATAAATGGTATAGTGTCTCAAACTCCTATGGATCGCATGGGAGAGACACGAGAGATATCATCATTAGTTGCTTTTCTTTGTCTTCCAGCTGCATCTTACATTACTGGACAAGTTATTGCTATTGATGGAGGTTTCACTGCTTAG 804 0.3856 MAESKLSSVKDKRWSLEGMIALVTGGTRGIGYAIVEELAEFGAAVHICSRNEDDINKCLEEWKSKGFNVTGSVLCDILSHEQRKTLMENVSSIFHGKLNILVNNAAKPSMKKILDNTEEDLTSIVGTNFVAGYNLCQLAHPLLKESGYGSIVFTSSIAGLRAIPVLSVYASTKGAVNIFTKNLALEWAKDNIRANAVAPGPVKTELLGSIMVCICPWGGAINGIVSQTPMDRMGETREISSLVAFLCLPAASYITGQVIAIDGGFTA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01931 267 Pfam Enoyl-(Acyl carrier protein) reductase 27 266 - -
Vivi6g01931 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 267 IPR036291 -
Vivi6g01931 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 IPR002347 -
Vivi6g01931 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Vivi6g01931 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Vivi6g01931 267 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Vivi6g01931 267 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Vivi6g01931 267 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Vivi6g01931 267 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Vivi6g01931 267 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Vivi6g01931 267 PRINTS Glucose/ribitol dehydrogenase family signature 229 249 IPR002347 -
Vivi6g01931 267 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Vivi6g01931 267 FunFam Short-chain dehydrogenase reductase 5 267 - -
Vivi6g01931 267 Gene3D - 2 267 - -
Vivi6g01931 267 PANTHER TROPINONE REDUCTASE 12 266 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01931 Vivi-Chr6 86966881 86974361 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01931 11 266 Miscellaneous Gene Families AT2G29290 53.516 2.42e-91 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01931 K08081 - tpra:123892393 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01931 6 86966881 86974361 Vivi6g01931 6 86966881 86974361 ECH
Vivi6g01931 6 86966881 86974361 Vivi3g04176 3 73601105 73602378 ECH
Vivi3g04206 3 74008386 74009998 Vivi6g01931 6 86966881 86974361 ECH