Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01922 ATGTCATCTCCTTCCTCCGTAGAATCAGTTCGAGATCTTCTCAACAAACCATGGAAAACCTTCCTCTTCCCCACAATCAAAAGCGATCACTTCTACCTATTCCTCAAACTCGGTCTCGCCATCTCCATCATCTTTCTCATCTCACACTTTTTCTACCTCTCAATCTCTTATCAAAAGCCACAAAACCAACTCAATCAATTAGCCCTAAAACAAATGTTCCAATCCGAAATTCCCAAAACCCTAACCCAACCTCCCAACACATCTCCAGATCCTATTCCAACCAATACTCCAACCACTATTCCAACCAATATCTCACACATCGTCTTCGGAATCGGCGCAACCTATTCCACCTGGGAGAATCGTCGTCACTATAGCGAACTCTGGTGGAACCATACTGTCACACGAGGCTTCGTCTGGCTCGACACCGCCCCGCCGAAGAACGAAACCTGGCCGAAAACTTCTCCGCCCTACAAAGTGTCCGCCGATACATCCTCCTTTAAATACACATGCGATTACGGCTCTCGTTCAGCAATCCGCATCGCGCGGATACTGAAAGAGACATTCAATCTAGGGTTAGATAATGTCAGATGGTTCGTGATGGGTGACGACGACACGGTATTCTTTCCGGAAAATCTTATTACGGTGTTGTCGAAATATGATCATAATCAATTGTATTATATTGGTGGAAATTCGGAGAGTGTGGAGCAAAATGTTGTGCATTTTTACACGATGGGTTATGGTGGCGGAGGGTTTGCTATAAGTTATCCTTTAGCGGCGGAGCTGGTGATGATTTTGGATGGTTGTATTGATCGGTATGCTGATTTATATGGATCTGATCAGAAAATTCAGAGTTGCATTAGTGAAATTGGAGTTCAGATTACTAAGGAACCTGGGTTTCATCAGATTGATATACATGGGAACCCTTATGGGTTATTGGCAGCACACCCAGTAGCACCATTGGTGTCACTGCATCATTTAGACTACGTGGACGCATTTTTCCCAGACATGGACCGGGTAGAGTCACTTAATAAGTTAATTACCGCGTATAAATCGGATCCAGGTCGGACCATCCAACCGAGTTTCTGCTATGACCACACCCGGAATTGGACCCTGTCAGTTTCTTGGGGCTACGTTGTTGAATTGTATCCCTATTTTCCCACGGCCAAAGAGCTTGAAACGCCGTTCTTAACCTTCAAAACATGGAAGAGTTGGAGTGATGGTCCGTTTACAGTAAATACACGGCCCATTAGTTGGGATATATGTCATAGGCCGCTAGTATATTTTCTAAATGAGATTGATGTGGGACAAGGAAAGACTCAGTCTAATTATAAAAGATACGCCAGCCCAATTCATTATGAGTGTGAGCGCGCTGATTACACGCAACCTTTAAAAGTTCAATATGTGAATGTATCGGCTCCTATATTTTCTTCTGGCTTGTGGAACAAGGCGCCACGTAGACAATGTTGCGAAATAATCAACGGCTCAGATAGTGTGGTCCAGGTCCAGGTAAGAGCATGTCAACCGTTTGAGAGTCTAACTCCTCATTAA 1548 0.4432 MSSPSSVESVRDLLNKPWKTFLFPTIKSDHFYLFLKLGLAISIIFLISHFFYLSISYQKPQNQLNQLALKQMFQSEIPKTLTQPPNTSPDPIPTNTPTTIPTNISHIVFGIGATYSTWENRRHYSELWWNHTVTRGFVWLDTAPPKNETWPKTSPPYKVSADTSSFKYTCDYGSRSAIRIARILKETFNLGLDNVRWFVMGDDDTVFFPENLITVLSKYDHNQLYYIGGNSESVEQNVVHFYTMGYGGGGFAISYPLAAELVMILDGCIDRYADLYGSDQKIQSCISEIGVQITKEPGFHQIDIHGNPYGLLAAHPVAPLVSLHHLDYVDAFFPDMDRVESLNKLITAYKSDPGRTIQPSFCYDHTRNWTLSVSWGYVVELYPYFPTAKELETPFLTFKTWKSWSDGPFTVNTRPISWDICHRPLVYFLNEIDVGQGKTQSNYKRYASPIHYECERADYTQPLKVQYVNVSAPIFSSGLWNKAPRRQCCEIINGSDSVVQVQVRACQPFESLTPH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01922 515 Pfam Protein of unknown function, DUF604 236 489 IPR006740 -
Vivi6g01922 515 Gene3D - 94 357 - -
Vivi6g01922 515 FunFam Fringe-related protein-like 94 350 - -
Vivi6g01922 515 PANTHER FRINGE-RELATED 41 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01922 Vivi-Chr6 86406865 86410824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01922 102 515 Glycosyltransferase AT2G37730 63.962 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01922 - - vvo:131611819 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01922 6 86406865 86410824 Vivi6g01922 6 86406865 86410824 ECH
Vivi3g04200 3 73967899 73970723 Vivi6g01922 6 86406865 86410824 ECH