Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04200 ATGATGATGATTCCGGATCGGTTAGAGACTTGTCATGATCCTCTTAGAATAACAAGATTAACTTTTATACCAGAAAAACTTGGTGATCTAGTTTCAATGGCAATAAAGATTGGCATACTGGTCTGTCTTATAGGATCCATAGCACTTGCTATCCATTCAACATTCGCTAAACCGGACCGGTGGTTTCCGTTACCGGAGCATTTGCATATTATACAGAATGATTCGATCATTGAAATCGACGTTGAAACAACAAACATCTCACATATTGTATTCGGCATTGCTGGCTCATCGAACACGTGGCATAGCCGTAGCAACTATGGGAAGCTTTGGTGGAATTCAAACACTTGTAGAGGTTATGTTTGGCTTGACAAGAGACCGAGGAATTTGAAGGCGGATGATGAGTTAATTCCATATAAAATCTCAAAGGGATGGGCCAAGTTCAAGCACACGCACTCTGCGTCTGCTGTTCGGATAGCTCGGATAGTTTATGACAGCTTTAGACTCGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGACGATGATACAGTGTTTTTTCCGGAGAATTTAGCTACTGTGTTGGGAAAATATGATCACAATCAGTTGTATTATATTGGTGGAAATTCTGAGAGTGTGGAACAAGATGTGATGCATTCTTTTGATATGGCTTTTGGTGGTGGTGGTATTGCAATTAGTTATGCATTAGCAGCTAGACTAGCCAATATTATGGATTCTTGTCTTCATAGATACTTTTATTTTTATGGTTCTGATCAAAGAGTTTGGGCTTGTATAAAAGAATTAGGAGTATCTCTTACCCGAGAAAGCGGATTCCATCAGTTTGACGTTCAAGGGAATCCATATGGTATTTTAGCCGCGCACCCTTTGGCGCCACTTGTGTCGCTCCATCACCTAGATCGATTGAACTCATTGTTTCCGAACCAAACTCAAATGAGTTCATTGAGAAAGCTCATCGGTGCATACCAGCTTGACCCTGCAAGGATAGTGCAGCAAAGTATTTGTTATGATCATAGCCGAAAATGGTCGATATCTATTTCATGGGGCTACTCAATACAAATCTATTCATTGTTGGTGAGTGCAGCAGATTTGCAGATGCCCTTGCAAACGTTTAAAACATGGAGAACTTGGAGCGACGGTCCTTTCACGTTTAATACTCGATGGATAAACCCTGATGTATGTGAGCAGCCATCTATATTTTTCCTGGATCGGGTTAAAAAGGTGGGCACCGGAAGTGTAATGACCTATAAGAGATCTGTTGACCAGGAAGCAAAGAAGTGCAACAGAGCAGATGGAGAACTTCGGAGAATTAAAGTTTCTGCCTTGAGGCTGAATTCAGAATATTGGAAGAATGTACCGCGTAGGCATTGCTGCCAATTTATGAATGGTGGAAGCATAAAGGATGGCAATGTGCATATCAGAATCAGGAAGTGCAGACCTCAAGAAACAATTTCTACTTAG 1476 0.4119 MMMIPDRLETCHDPLRITRLTFIPEKLGDLVSMAIKIGILVCLIGSIALAIHSTFAKPDRWFPLPEHLHIIQNDSIIEIDVETTNISHIVFGIAGSSNTWHSRSNYGKLWWNSNTCRGYVWLDKRPRNLKADDELIPYKISKGWAKFKHTHSASAVRIARIVYDSFRLGLPNVRWFVMGDDDTVFFPENLATVLGKYDHNQLYYIGGNSESVEQDVMHSFDMAFGGGGIAISYALAARLANIMDSCLHRYFYFYGSDQRVWACIKELGVSLTRESGFHQFDVQGNPYGILAAHPLAPLVSLHHLDRLNSLFPNQTQMSSLRKLIGAYQLDPARIVQQSICYDHSRKWSISISWGYSIQIYSLLVSAADLQMPLQTFKTWRTWSDGPFTFNTRWINPDVCEQPSIFFLDRVKKVGTGSVMTYKRSVDQEAKKCNRADGELRRIKVSALRLNSEYWKNVPRRHCCQFMNGGSIKDGNVHIRIRKCRPQETIST 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04200 491 Pfam Protein of unknown function, DUF604 214 463 IPR006740 -
Vivi3g04200 491 PANTHER FRINGE-RELATED 34 489 - -
Vivi3g04200 491 FunFam Fringe-related protein-like 77 328 - -
Vivi3g04200 491 Gene3D - 78 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04200 Vivi-Chr3 73967899 73970723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04200 12 489 Glycosyltransferase AT3G11420 51.822 2.53e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04200 - - gmx:100802549 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04200 3 73967899 73970723 Vivi3g04200 3 73967899 73970723 ECH
Vivi3g04200 3 73967899 73970723 Vivi6g01922 6 86406865 86410824 ECH