Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01637 ATGTATTTTGACAAAGCCCGGAAAACTCGACCTGGCACTAAAATGATCAATCCGAATGACCCTGAGGAAAATGCAGATTTAGATCTTCCAAATTCATCTTCTGCTGATGTAATTCCTCCAAAGCCAAGAGTTCACTCAGAGAATATATCTGAAAAAGGATCAGCGAGACCAGCACATAATGAGTTACAAAAAAACAAGGAAGACAGTGATCTTAAGCAATCTGTTAACTCGCCAGCTCGCAATGAAAGTTCAAACAACAAGAGTGCTGGTGATTCCGTCCATCGTCCTGGAGTTGTTTCTGCTGATAACCGCAGAAGACCTTCAAGACAAAGTACTGCTGGCTCGGAGTACAGTGTCGAACGTTCACCTCTTCATCGCCAGGCTAAAACCCCTGGCAGAGATAGCCCTTCTTGGGAAGGAAAGAATTCATATGAGAGCAGTCACGGTACACCGGGAAGATCTCGATTGAGATCAGTCAATCGAGAGGATGAAAATCCTGATAAAAGTGCTGCTGTTCCAAAGTTTGGTGAGTGGGATGAGAATGACCCTGCATCAGCTGATGGCTACACTCACATTTTCGACAAAGTGCGCAAGGAAAAACAAGACACGGCTGGAAACGCACCAGGCACACCGAACGGGAGATCGTATGTTATCCGTAACCAACCTCCAAGTGACAAAGCTCAGGGTTGCTGTTTTTTCTGGAGCAGAAAATGA 714 0.4524 MYFDKARKTRPGTKMINPNDPEENADLDLPNSSSADVIPPKPRVHSENISEKGSARPAHNELQKNKEDSDLKQSVNSPARNESSNNKSAGDSVHRPGVVSADNRRRPSRQSTAGSEYSVERSPLHRQAKTPGRDSPSWEGKNSYESSHGTPGRSRLRSVNREDENPDKSAAVPKFGEWDENDPASADGYTHIFDKVRKEKQDTAGNAPGTPNGRSYVIRNQPPSDKAQGCCFFWSRK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01637 237 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 2 219 IPR040387 -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 199 237 - -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 74 91 - -
Vivi6g01637 237 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 166 201 IPR008700 -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 1 187 - -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 205 222 - -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 155 175 - -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 136 154 - -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 104 118 - -
Vivi6g01637 237 MobiDBLite consensus disorder prediction 45 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01637 Vivi-Chr6 74479558 74482827 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01637 K13456 - gmx:100499219 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01637 6 74479558 74482827 Vivi7g03848 7 104489608 104492030 PCT