Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01317 ATGTCAAAAACCAATTTCATATCCTCTTTCTTTATTCATCTCTTCAAACACCAAAACTTTATTATATATAAATGCCATTTCCATAACTCTTCTACACAAACAAACCCCACAATCACTTACTACTTGAAAATGGGTTCTTCTTCAATGACAATCTCCCCAAGAAAGCTTCATTCAGATTTATACTCCTTTTCACACCAACAAGATTCTAGCACTCCACTAGTGATAAATGTTCTTGCTTCATTGATTGAGAGAAACATGGCAAGAACAAAGAGAATAGTGAAAAATTGTTCTAAGTCTTTGTCTAAGGCAATTAGTACAAACATCTTTGATTGTAGAGAGATCCCAGATTTGTCAATCCAATCTTATTTAGAGAGAATTTTTAGGTACACTAAAGCAGGATCTTCGGTTTATGTTGTGGCTTATGTTTATATTGATAGGTTTTGTCAGATCAATCCTGGATTTAGAATCAATGCTAGAAATGTTCATAGACTTCTCATTACAACTATCATGGTGGCTTCCAAATATGTTGAAGACTTGAACTATAGAAATTCATACTTTGGAAGAGTTGGTGGATTAACAACTATTGAGCTAAACAAGTTGGAGCTTGAATTTCTGTTCATGATGGGATTCAAATTACATGTAAATGTGAGTGTTTTTGAGAGTTATTGTTGTCATTTAGAGAGAGAGGTTGGAATTGGGGGAGGGTACCATATTGAGAAGACATTAAGGTGTGCAGAAGAAATCAAAGCAAGACATAGGAAAGAAATTACGGGTTACACACAGATTCCTCGTGTTATGTTGTAA 804 0.342 MSKTNFISSFFIHLFKHQNFIIYKCHFHNSSTQTNPTITYYLKMGSSSMTISPRKLHSDLYSFSHQQDSSTPLVINVLASLIERNMARTKRIVKNCSKSLSKAISTNIFDCREIPDLSIQSYLERIFRYTKAGSSVYVVAYVYIDRFCQINPGFRINARNVHRLLITTIMVASKYVEDLNYRNSYFGRVGGLTTIELNKLELEFLFMMGFKLHVNVSVFESYCCHLEREVGIGGGYHIEKTLRCAEEIKARHRKEITGYTQIPRVML 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01317 267 CDD CYCLIN_AtCycU-like 105 230 - -
Vivi6g01317 267 Gene3D - 62 257 - -
Vivi6g01317 267 PANTHER UNCHARACTERIZED 53 239 IPR013922 GO:0000079|GO:0019901
Vivi6g01317 267 Pfam Cyclin 98 212 IPR013922 GO:0000079|GO:0019901
Vivi6g01317 267 SUPERFAMILY Cyclin-like 122 213 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01317 Vivi-Chr6 52848073 52849869 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01317 - - vvo:131611522 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01317 6 52848073 52849869 Vivi6g01317 6 52848073 52849869 ECH
Vivi6g01317 6 52848073 52849869 Vivi5g00952 5 21914195 21915812 PCT