Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06487 ATGATAACATTAACAGATTTCTACCATGTTATGACAACAATGGTGCCACTGTATGTAGCCATGATCTTAGCTTATGGTTCAGTCAAATGGTGGAAAATCTTCACTCCTGATCAATGTTCAGGAATCAACCGTTTCGTTGCTTTTTTTGCAGCTCCTTTACTTTCATTCCATTTCATAGCCTCTAACAATCCATACAAAATGAACCTACGGTTCCTCTCCGCAGACACACTCCAGAAAATCATAGTCATAACCGCTCTAACCATTTGGGCTAATGTTAGCAAAAGAGGTTGTTTAGAATGGACAATAACACTATTTTCCATTTCAACTCTTCCGAACACTTTGGTTATGGGAATACCTCTCTTGAAAGGGATGTACGGTGAGTTCTCAGGGAGTTTGATGGTGCAAATCGTGGTTCTTCAGTGTATAATTTGGTATACTTTGATATTGTTCTTGTTTGAGTATAGAGGGGCGAGAATGCTTATCTCAGAACAGTTTCCAGATACTGCTGGCACCATTGTTTCCATTCATGTTGATTCTGATGTAATGTCTATGGATGGAAGACAATGTTTGGAAACAGAAGCTGAAGTTAAAGAAGATGGGAAGCTTCATGTTACAGTGAGAAAATCAAATGCTTCAATATCGGATATATATTCAAGAAGATCTCATAATTCTCATGCAAATACAACACCTCGTGCTTCAAATCTGACAAATGCGGAGATATACTCTTTGCAATCTTCTAGGAATCTAACTTCAAGAGGGTCAAGTTTCAACCACACAGATTTCTATTCAATGATGGGTCGAAATTCAAACTTTGGTGCTTCTGATTTGAAGGGAACAACACCAAGAAGTTCTAACTATGATCTTCCAACAACGGGGAATAATTATCCTACACCGAACCCTGGAATGTTCTCTCCTAAGAATGTTGCTACTAAGAAGGCTAACAATAGTAGTAATAGTAATGGTCAAGTGGCTGTGAAAACTGATGACCTTCATATGTTTATTTGGAGTTCAAGTGGCTCTCATGTTTCTGATGTGTTCGGTTCTCATCTTGAATATGGAGGAACTGGAACTGGAAATGGAGTTCAAGTTCATCATGATCAGAAACAAGTCAAGATGAATCTCTCTCCTAGAAAAGGGGAGGGTGAAGAGGAATACATAGATGAGTCTAGGAATGAGGAAAGAGGAAAGGGGAACCCTAAAGTTATGCCACCAGCAAGTGTAATGACAAGGCTAATATTGATAATGGTTTGGAGAAAATTTATCAGAAATCCAAACACATATTCCAGCATTATAGGCTTAACTTGGTCACTTGTTTCATTCAGGTGGAATATTGAAATGCCTGTTATCATAGCAAAGTCCATTTCTATATTATCAGATGCAGGACTTGGCATGGCCATGTTCAGTCTTGGTTTGTTTATGGCTTTGCAACCAAGGATCATAGTATGTGGTAATTCTGTAGCAACTTTTTCAATGGCCGTTAGATTCCTTACCGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGTCTTAGAGGAACCCTCTTGCATGTTGCCATTGTTCAGGCAGCTCTTCCACAAGGAATTGTCCCATTTGTTTTTGCCAAGGAATACAATGTACATCCTGATATTCTCAGTACAGGGGTAATTTTTGGGATGTTGATTGCATTGCCCATAACGTTGGTTTATTACATCTTGTTGGGGCTATGA 1710 0.3924 MITLTDFYHVMTTMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVAFFAAPLLSFHFIASNNPYKMNLRFLSADTLQKIIVITALTIWANVSKRGCLEWTITLFSISTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLILFLFEYRGARMLISEQFPDTAGTIVSIHVDSDVMSMDGRQCLETEAEVKEDGKLHVTVRKSNASISDIYSRRSHNSHANTTPRASNLTNAEIYSLQSSRNLTSRGSSFNHTDFYSMMGRNSNFGASDLKGTTPRSSNYDLPTTGNNYPTPNPGMFSPKNVATKKANNSSNSNGQVAVKTDDLHMFIWSSSGSHVSDVFGSHLEYGGTGTGNGVQVHHDQKQVKMNLSPRKGEGEEEYIDESRNEERGKGNPKVMPPASVMTRLILIMVWRKFIRNPNTYSSIIGLTWSLVSFRWNIEMPVIIAKSISILSDAGLGMAMFSLGLFMALQPRIIVCGNSVATFSMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06487 569 MobiDBLite consensus disorder prediction 273 297 - -
Vivi5g06487 569 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 569 - -
Vivi5g06487 569 MobiDBLite consensus disorder prediction 375 397 - -
Vivi5g06487 569 MobiDBLite consensus disorder prediction 375 401 - -
Vivi5g06487 569 Pfam Membrane transport protein 9 564 IPR004776 GO:0016020|GO:0055085
Vivi5g06487 569 NCBIfam auxin efflux carrier 1 569 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06487 Vivi-Chr5 171566342 171569881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06487 1 560 Organic Solute Cotransporters AT1G73590 65.869 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06487 K13947 - gmx:100499637 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06487 5 171566342 171569881 Vivi5g06487 5 171566342 171569881 ECH
Vivi5g06487 5 171566342 171569881 Vivi4g00357 4 7956141 7960390 PCT