Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00357 ATGATAACTCTAATAGACTTCTACCATGTCATGACAGCAATGGTGCCCCTCTATGTTGCCATGATCCTAGCCTATGGATCAGTAAAATGGTGGAAGATTTTCTCACCTGATCAATGCTCAGGAATCAACCGTTTCGTAGCACTCTTCGCTGTTCCACTTCTCTCCTTCCATTTCATAGCCTCAAACAACCCATACAAAATGAACCTAAGATTCTTAGCAGCAGACACACTTCAAAAAATCATGATCCTCACCCTTCTCTTCATATGGAGCAACTTCTCCAAAAGGGGTTCCCTTGAATGGACCATAACACTCTTCTCTCTCTCCACTCTCCCCAACACGTTGGTCATGGGAATCCCTCTCCTCAAAGGAATGTACGGTGAATTCTCAGGTAGTCTAATGGTGCAAATCGTTGTTCTTCAATGCATAATCTGGTACACCATGATGCTTTTCATGTTTGAGTTTCGAGGAGCAAGGTTGTTGATATCTGAACAGTTCCCCGACACTGCTGGTTCCATTGTTTCAATCCATGTTGACTCTGATGTCATGTCGCTAGACCGTAGAACACAGCTGGAAACAGATGCTGAAATCAAAGAAGACGGTAAACTTCATGTTACTGTAAGAAAATCAAATGCTTCGAGATCGGATATTTACTCTAGAAGATCACAGGGTCTCTCTTCCAACACTCCTAGACCTTCTAACCTTACGAATGCCGAGATTTACTCGCTGCAATCGTCGCGTAATCCTACGCCGAGAGGCTCTAGTTTTAACCATACTGATTTTTACTCCATGATGGGTGGTGGAAGGAACTCTAACTTTGGTCCTTCTGATGTTAATAACTACGGTTTATCGGCCTCGCGAGGGGTTACTCCGAGGCCTTCGAATTACGAAGAAGATGCTTCGAATGCGAAGAAGTTGAAGCATTATCCCGCTCCTAATCCGGGAATGTTTTCGCCTACTAATAAGAATCTTGGTGCTAATGTTAATGTTAAGAGAAGTAATGGCCAGAATCAGAATCAGAATCAGAATCAACAGAAACAAGATGATCTTCATATGTTTGTGTGGAGTTCTAGTGCTTCTCCTGTTTCTGATGTGTTTGGTGGACATGAGTTTGGTGCTCATGATCAGAAAGAAGTTAAATTGAATGTGTCTCCAGGGAAAGTGGAGGGTCATAGAGAAACTCAAGAGGACTATTTGGAGAAAGATGAATTCAGCTTTGGTAATAGAGGAATGGAAAGGGAAATGAATAATCAACAACATGATGGTGAAAAACTTGGAGATGGAAAATCAAAAGTTATGCCACCAGCTAGTGTTATGACAAGGCTTATATTGATTATGGTTTGGAGAAAACTTATCAGAAATCCAAACACTTACTCGAGCTTAATCGGTCTCGTTTGGTCTCTAGTTTCATTCAGATGGAATGTTGAAATGCCTGCTATAATAGCAAAATCTATATCTATATTGTCAGATGCAGGACTTGGCATGGCCATGTTCAGTCTAGGATTATTCATGGCATTGCAACCAAAAATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCTATGGCTGTGAGATTCCTTACAGGTCCAGCTGTGATGGCAGCTGCTTCATTTGCTGTTGGACTCAAAGGTGTTCTTTTTCATGTTGCAATTGTTCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCTAAAGAATATAATGTACATCCTGATATTCTAAGCACAGGTGTCATTTTTGGAATGTTGATTGCATTGCCCATTACTCTAGTGTACTACATTTTAATGGGACTATGA 1800 0.4128 MITLIDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIMILTLLFIWSNFSKRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTMMLFMFEFRGARLLISEQFPDTAGSIVSIHVDSDVMSLDRRTQLETDAEIKEDGKLHVTVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMGGGRNSNFGPSDVNNYGLSASRGVTPRPSNYEEDASNAKKLKHYPAPNPGMFSPTNKNLGANVNVKRSNGQNQNQNQNQQKQDDLHMFVWSSSASPVSDVFGGHEFGAHDQKEVKLNVSPGKVEGHRETQEDYLEKDEFSFGNRGMEREMNNQQHDGEKLGDGKSKVMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIAAFAMAVRFLTGPAVMAAASFAVGLKGVLFHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILMGL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00357 599 NCBIfam auxin efflux carrier 1 599 IPR014024 -
Vivi4g00357 599 Pfam Membrane transport protein 9 594 IPR004776 GO:0016020|GO:0055085
Vivi4g00357 599 MobiDBLite consensus disorder prediction 272 296 - -
Vivi4g00357 599 MobiDBLite consensus disorder prediction 213 234 - -
Vivi4g00357 599 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 598 - -
Vivi4g00357 599 MobiDBLite consensus disorder prediction 272 300 - -
Vivi4g00357 599 MobiDBLite consensus disorder prediction 317 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00357 Vivi-Chr4 7956141 7960390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00357 1 590 Organic Solute Cotransporters AT1G73590 70.906 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00357 K13947 - gmx:100499637 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06487 5 171566342 171569881 Vivi4g00357 4 7956141 7960390 PCT