Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06401 ATGAAGCTATCATCAACACTGAATTTGAACCCTCTCACTTTTCAATCCAAATTCAAATTCACACTTTCCATTCTCAACTCTTTTTCTTTCTCTTCTCTCTCCAAAGACGATACCACCCAATGCAATCGCAATTTCAACAACAACGCCATCGACCGAATACTTCTCCGCTTTCGCACTTTATCCGAACTTTCCAATCATCATCATGATGAACCTACCCGAACCCTACCGCCACATCAATTTTTGCACCGACAATGGCTTCGCTCCGATGACGCGATTTTTCCATCGGAGAACAACGAAGAGAAGGTATTGAAGAAGAAAAAGAAGAAGAACGAAGTGATGGCACAGTGTTTGGCGGAAGAAGAACTGAATCGATTGCGAACAATCGGAATGAATCTCAAGGAGAAAATCAGTATCCCTAAATCGGGTCTCACGCGTCCTGTCCTACACAAAATTCATCATCAGTGGAACAATAGCGAGTTGGTGAAGCTCAAGTTTCATGAGTTTCTTTCCCAGAATATGAAACTTGCTCATGACATCGTTCAGGTACCTCTCTTTCTTCCTTCTTTTTCATCATCACCATCGTGGATACCTGTTCACATTAATATTTATCCTATGCTGCACACCATAGTTTTCTAA 636 0.4151 MKLSSTLNLNPLTFQSKFKFTLSILNSFSFSSLSKDDTTQCNRNFNNNAIDRILLRFRTLSELSNHHHDEPTRTLPPHQFLHRQWLRSDDAIFPSENNEEKVLKKKKKKNEVMAQCLAEEELNRLRTIGMNLKEKISIPKSGLTRPVLHKIHHQWNNSELVKLKFHEFLSQNMKLAHDIVQVPLFLPSFSSSPSWIPVHINIYPMLHTIVF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06401 211 Gene3D - 116 182 IPR035920 -
Vivi5g06401 211 SUPERFAMILY YhbY-like 117 180 IPR035920 -
Vivi5g06401 211 ProSiteProfiles CRM domain profile. 115 211 IPR001890 GO:0003723
Vivi5g06401 211 Pfam CRS1 / YhbY (CRM) domain 117 182 IPR001890 GO:0003723
Vivi5g06401 211 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 78 180 IPR045278 GO:0000375|GO:0003729
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06401 Vivi-Chr5 170588036 170589413 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06401 - - vvo:131603903 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06401 5 170588036 170589413 Vivi5g06401 5 170588036 170589413 ECH
Vivi5g06401 5 170588036 170589413 Vivi4g00200 4 3538047 3542643 PCT