Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06064 ATGTCACCCAAAACCATTCTTGTTACCGGCGGTGCCGGTTACATCGGAACCCACACCGTTCTCCAGCTTCTTCTCGCCGGTTACAAAGTCGTCGTCGTCGATAATCTCGATAATTCTTCCGCCAAATCCATCGATAGAGTCAAGTCTCTCGCCGGTAAATCCGCCGGTAACCTTTCGTTTCATAAGTTAGACCTGCGGAACCGAGATGAACTGGAGAAGATTTTTTCTTCCACAAAGTTTGATGCAGTCATACATTTTGCTGGGCTAAAAGCTGTAGGTGAAAGTGTGCTGAAACCACTGATATACTATAACAACAACTTGATTGGGACAATTGTTCTATTTGAAGTCATGGCCGCCCACGGATGCAAGAAGCTTGTGTTCTCCTCTTCCGCCACTGTATATGGTTGGCCAAAAACAGTCCCTTGTACCGAAGAGTTCCCTTTATCAGCTGTAAACCCATATGGACGAACGAAGCTTTACGTTGAAGAAATTTGTCGTGATATCTATCATGCAGATTCAGAATGGAAAATAACACTGTTGAGATACTTCAACCCAGTTGGTGCTCATCCTAGTGGTCATATCGGCGAGGATCCTCGCGGAATACCTAACAACCTCATGCCTTTTGTTCAGCAAGTTGCAGTTGGCAGACGCCCCGCATTGACAGTTTTTGGAACAGACTATAGTACAAATGATGGAACCGGAGTTCGCGATTATATTCATGTTGTTGATTTAGCAGATGGGCACATTGCTGCATTGCGTAAACTAGACGATCCTAAAACAGGTTGTGAGGTTTTCAACTTGGGAACAGGAAAGGGAACATCAGTCTTCGAGATGATTACAGCTTTTGAAAAGGCCTCTGGAAAGAAAATTCCAATTGTAAAAGCTGGTCGGAGACCTGGAGATGCCGAAACTGTTTATGCATCAACATCAAAAGCAGAAAAAGAACTTAACTGGAAGGCTAAATATGGCATCGATGATATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGTAAAGAATGA 1038 0.4393 MSPKTILVTGGAGYIGTHTVLQLLLAGYKVVVVDNLDNSSAKSIDRVKSLAGKSAGNLSFHKLDLRNRDELEKIFSSTKFDAVIHFAGLKAVGESVLKPLIYYNNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKTVPCTEEFPLSAVNPYGRTKLYVEEICRDIYHADSEWKITLLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYSTNDGTGVRDYIHVVDLADGHIAALRKLDDPKTGCEVFNLGTGKGTSVFEMITAFEKASGKKIPIVKAGRRPGDAETVYASTSKAEKELNWKAKYGIDDMCRDQWNWASKNPYGYGKE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06064 345 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Vivi5g06064 345 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Vivi5g06064 345 Gene3D - 194 335 - -
Vivi5g06064 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Vivi5g06064 345 FunFam UDP-glucose 4-epimerase 6 199 - -
Vivi5g06064 345 Gene3D - 6 275 - -
Vivi5g06064 345 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 344 - -
Vivi5g06064 345 NCBIfam UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06064 Vivi-Chr5 165702855 165707387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06064 5 319 Miscellaneous Gene Families AT4G00110 28.228 1.75e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06064 K01784 - zju:107429837 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03966 2 152351583 152355193 Vivi5g06064 5 165702855 165707387 PCT