Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06056 ATGGATGATAGACCTGCAAAATTAAATATCATTCCGGATCACTTTCAAATTCCAACATCAAGTATAGAATCTCCTGAGAGCAGAAAATCATCTACTAGTACTGCCGAAGAACCTGAAATTGATCAATCTGTAAGGCCCTCGCCCCAGCTGTGGACTCCAAGAAAATTTAGGACAAGTTTCATGTTGAACTTGTTTACTCTACGAAGACTGTCATGGGGGTCCGATACTGGAGCTCAGGAAAAGGTTGAGCTTACAGCTGCAGAAGTAGAATCACTTCGATCGGAGCTTGCTGATTTAGAGGAAAGGGAAGCTCACTTGAAAGCTCAGTTGCAACATATTGATGAAGTTTTGCGGTCAGCTCGTCTATCAGGCTATTTACATATTAGAACTAGATGGTCAGCACTTCCGGGAGAGCCCGAACCTATAGATGATACTGAAGTAGATGATCGGCTTCCACGCTTTGTCGTTCTCCATGGAGCATGTATATTCTTATATTTGTTGTGTACAGATATAAGTCCTCAAGACTCAACACTTCTATCTGATATTCTTGAAGTAGGAAGATTGCCAAGTTTTAAATACGAAAATGATGATATTCAACATGCCTTTTATATTCTAACTCGTCATGGATATCGCTATGAGTGCTCAAGCAGTTCTATGATTCAGGTGGACTCTTGGTTAACAGCTTTAGAAAGTTACTGCAAAATAGATTCTGATAGATCAGTTCCTAATGGTTAG 735 0.4014 MDDRPAKLNIIPDHFQIPTSSIESPESRKSSTSTAEEPEIDQSVRPSPQLWTPRKFRTSFMLNLFTLRRLSWGSDTGAQEKVELTAAEVESLRSELADLEEREAHLKAQLQHIDEVLRSARLSGYLHIRTRWSALPGEPEPIDDTEVDDRLPRFVVLHGACIFLYLLCTDISPQDSTLLSDILEVGRLPSFKYENDDIQHAFYILTRHGYRYECSSSSMIQVDSWLTALESYCKIDSDRSVPNG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06056 244 SMART PH_update 120 236 IPR001849 -
Vivi5g06056 244 Coils Coil 82 116 - -
Vivi5g06056 244 MobiDBLite consensus disorder prediction 1 49 - -
Vivi5g06056 244 PANTHER OS05G0595500 PROTEIN 1 233 - -
Vivi5g06056 244 SUPERFAMILY PH domain-like 114 233 - -
Vivi5g06056 244 CDD PH 153 229 - -
Vivi5g06056 244 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06056 Vivi-Chr5 165600440 165604169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06056 - K00940 vvo:131603714 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06056 5 165600440 165604169 Vivi5g06056 5 165600440 165604169 ECH
Vivi2g03956 2 152102654 152104829 Vivi5g06056 5 165600440 165604169 PCT