Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03956 ATGTTGAAGTTGTTTACTCTTCGGAGGCTGCCATGGAGCCCCAATCATGGTAGTCAGGGAAAGGTTCAGTTAACAGCTGCAGAAGTAGAGTCTCTTCGATCAGAACTTGTTGATTTAGAAGAGAAGGAGGCTCAGTTAAAAGCTCAGTTGGAAAATATTGATGAAATTTTACGGTCAGCTCGTCTATCTGGATATTTATACATCCGAACTAGATGGGCGGCACTACCGGGTGAACCTCCAACTATTGATGATACCGAAGTAGATGATTGGCTTCCTCGCTTTGTTGTTCTTCAGGGTGAATGTTTATTCTTATATTTGTTGTGTACAGACTTAAGTCCTCAAGATTCAACGCTTCTATCTGACATTGTTGAAGTAAACCAATTACCAAGTTTTAAGCGTGAAGATGGTGAGATGAGATACGCCTTTTCTATTTTAACTCGACAAGGTTTACGATATGAATGTTCAAGCAGTTCTAAGATACAGGTGGACTCATGGTTATCAGCTCTACAATCTGACTGCAAACTGGAATCTGATACATCAACTTCCAATGGTTCAATACAGATGTAA 567 0.4004 MLKLFTLRRLPWSPNHGSQGKVQLTAAEVESLRSELVDLEEKEAQLKAQLENIDEILRSARLSGYLYIRTRWAALPGEPPTIDDTEVDDWLPRFVVLQGECLFLYLLCTDLSPQDSTLLSDIVEVNQLPSFKREDGEMRYAFSILTRQGLRYECSSSSKIQVDSWLSALQSDCKLESDTSTSNGSIQM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03956 188 SMART PH_update 60 176 IPR001849 -
Vivi2g03956 188 ProSiteProfiles PH domain profile. 59 174 IPR001849 -
Vivi2g03956 188 Coils Coil 22 59 - -
Vivi2g03956 188 PANTHER OS05G0595500 PROTEIN 1 182 - -
Vivi2g03956 188 Gene3D - 57 185 IPR011993 -
Vivi2g03956 188 SUPERFAMILY PH domain-like 53 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03956 Vivi-Chr2 152102654 152104829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03956 - - psat:127120811 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03956 2 152102654 152104829 Vivi5g06056 5 165600440 165604169 PCT