Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06050 ATGGCGGAAGAGAAATCGTTCATCGTCGAGGTCGAGAAAGCGAGGGAAGCCAAAGACGGTAAGCCATCTCTAGGTCCCGTCTATCGTAACTGCTTCTCTAAGGATCATTCATCGGCTCCTTCCATCGAAGGTCTCGATTCATGCTGGGATGTTTTTAGGACGGCTGTTGAGAAGTATCCAACAAATCGAATGCTTGGTCGCCGTGAAATAGTGGATGGGAAACCTGGAAATTACAAGTGGCAAACTTACAAGGAAGTGTATGACTTGGTGGTCAAACTTGGAAATTCCATTCGTGCTTGTGGTTATGGGGAAGGAGTAAAATGTGGTATTTATGGAGCCAACTGTTCGGAATGGATTATGAGCATGGAGGCCTGCAATGCTCATGGACTTCTTTGTGTTCCTTTATATGATACCTTAGGTGCCGGGGCTGTGGAGTTTATCATATGCCATGCAGAAGTCTCACTTGCATTTGTTGAAGAAAAGAAGATACCTGAGTTATTAAAGACATTTCCAAATGCAGCAAAATATCTCAAGACACTTGTGAGCTTTGGAAAGGTTACTCCAGAACAAAAGCAAGAAGTTGACAAGTTTGGGCTGAAATTTTATTCCTGGGATGAATTTTTAGAAGTGGGACATGATAAGAGTTTTGATACTCCTGTGAAAAAGAAAAGTGACATATGTACAATAATGTACACCAGTGGAACCACTGGTGATCCCAAGGGAGTATTGATATCCAATGAGAGCATTGTTACACTCTTAGCTGGCATAACGCTGCTACTAGGTAGTTGCAACGAAGAGTTGAATGATAAAGATATATTCCTATCATACCTTCCACTTGCACACATCTTTGACAGGATTGTTGAAGAGGCAATGATCTGGGTTGGTGCTTCAATCGGTTTCTGGCGTGGGGATGTCAAATTGTTGATGGAAGACATTGCTGAGTTAAAACCAACGATTTTTATTGCTGTTCCCCGTGTGCTTGATAGAGTGTACACAGGTTTGCAACAAAAGCTTAAGACGGGGGGTTTTGTGAAACAGACAATGTTCAATTTTGCCTACTCATTCAAGTTGCTTAACATGAAAAGAGGGCAAAAACATGATTCAGCGTCTCCATTATTTGACAAAGTTGTATTTAATAAGGTAAAAGATGCTTTAGGGGGTAATGTACGTATTATTTTGTCCGGAGCTGCGCCTCTGTCTAAGCATGTTGAAGGTTTCCTGCGTGTGGTGACTTGTGCTCATATCCTACAAGGATATGGTCTTACCGAAACATGTGCTGGATCCTTTTTGGCAATACCAAACGAAATAGACATGCTTGGTACCGTTGGCCCTCCTTTACCATATCTGGATGTGTGTCTGGAATCTGTACCTGAAATGGGATATGATGCACTAGCAACCACTCCAAGAGGAGAAATCTGTATGAGGGGAAGTAGTGTATTTTCAGGGTACTACAAACGCGAAGACCTTACGAAAGAAGCTATTACCGATGGATGGTTCCATTCAGGAGATATTGGAGAGTGGCAACCTAATGGAAGTATGAAAATTATCGACCGAAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTAGAGAATATTTATGCTCAAGTTTCGGCTATTGAATCGATATGGGTCTATGGAAACAGTTTTGAATACTTCCTTGTGGCTGTTATTAACCCACACAAGCAAGTGCTTGAAGCTTGGGCAGAAGGAGAAGGTATAAAAATGGACTTTGAATCTCTCTGTAAAGATTCAAAAACAAAAAAATACATGGTTGGAGAGCTCGTAAAGATTGCAAAGGAAAAGAAGTTGAAAGGTTTTGAGTTTATAAAAGCCGTTCATCTTGAACCAGTTCCGTTTGACATGGAACGTGACCTTATCACGCCAACATTTAAGAAAAAGAGACCCCAGTTGCTTAAATATTATCAGGATATCATTAACGAGATGTACGAGACAACAAAAAAGGCCAGTGCCTGA 1995 0.41 MAEEKSFIVEVEKAREAKDGKPSLGPVYRNCFSKDHSSAPSIEGLDSCWDVFRTAVEKYPTNRMLGRREIVDGKPGNYKWQTYKEVYDLVVKLGNSIRACGYGEGVKCGIYGANCSEWIMSMEACNAHGLLCVPLYDTLGAGAVEFIICHAEVSLAFVEEKKIPELLKTFPNAAKYLKTLVSFGKVTPEQKQEVDKFGLKFYSWDEFLEVGHDKSFDTPVKKKSDICTIMYTSGTTGDPKGVLISNESIVTLLAGITLLLGSCNEELNDKDIFLSYLPLAHIFDRIVEEAMIWVGASIGFWRGDVKLLMEDIAELKPTIFIAVPRVLDRVYTGLQQKLKTGGFVKQTMFNFAYSFKLLNMKRGQKHDSASPLFDKVVFNKVKDALGGNVRIILSGAAPLSKHVEGFLRVVTCAHILQGYGLTETCAGSFLAIPNEIDMLGTVGPPLPYLDVCLESVPEMGYDALATTPRGEICMRGSSVFSGYYKREDLTKEAITDGWFHSGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYAQVSAIESIWVYGNSFEYFLVAVINPHKQVLEAWAEGEGIKMDFESLCKDSKTKKYMVGELVKIAKEKKLKGFEFIKAVHLEPVPFDMERDLITPTFKKKRPQLLKYYQDIINEMYETTKKASA 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06050 664 CDD LC-FACS_euk 76 656 IPR045311 GO:0004467|GO:0006631
Vivi5g06050 664 Gene3D - 43 518 IPR042099 -
Vivi5g06050 664 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 656 - -
Vivi5g06050 664 Pfam AMP-binding enzyme 59 526 IPR000873 -
Vivi5g06050 664 ProSitePatterns Putative AMP-binding domain signature. 229 240 IPR020845 -
Vivi5g06050 664 SUPERFAMILY Acetyl-CoA synthetase-like 45 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06050 Vivi-Chr5 165533870 165541437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06050 1 664 Acyl Lipid Metabolism Gene Families AT4G11030 70.783 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06050 K01897 - gmx:100811306 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03955 2 152076903 152085484 Vivi5g06050 5 165533870 165541437 PCT