Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05857 ATGTTTAGATGGAGGAGTGAGAAAAACAAGGTCAAAGCCGTTTTCAAACTCCACTTCCATGTCACTCAGGTGGTGCAATCTGGTGTGGTTGATTCTTTGGTACTTTCTATAGTGCCTGGAGATATTGGGAAACCTACTACCAGATTAGAGAAAGCGGTGATTAACAATGGAGTTTGTAAATGGGAGAATCCGGTTTATGAAACTGTTAAGTTTATTCGTGACCCGAAGAATGGGAGATTCGGTGAAAGAGTTTATTATTTTGTGATTTCTACGGGTTTATCGAAAGCTAGTACGTTTGGAGATGTTTCTGTTGATTTTGCTGATTATGCAGAAGCTACGAAGATTTCAAATGTTGCTCTTCCTATCAAGAATTCTCATTCTGATGCTGTCTTGCATGTATCGATCCAGAGATTACAAGAGAATAATGATAAAAGAGAAGAAGAGGAGTGTGAGGATACCAAATTGAAACCTAATGATAAGAGTTTAAGAACTTATTTAAGCAATGGAGATGCAGTTTCGCAGACTAAAAGTGATTCTTCTGAAATTTCACAGGATGTGTCTGGCAATGGAAACTCGGAAAGAGCTGGATTGAGTGCTGATTGTAGGACATCTAGTGGATCTGATGTTACATTGTCGAGTTCTGACGGAAGCTTTGGACTTGATACTCCCCGAGAACTTGGACTACGAAATACCAGCATCCATCCCACAAAAATCGGTGTTCCTTCAGTTACTAACCACTTTTCTGAGGCTCATAAGCCTGCGGTAAATGCTTTATCATCATTGTATGATGTACATCAGAGATCGTCACACTTCCGAGATTCTTCAGGCGGGTCAGAGCATGGTCTCAGTACGGAAGGTTCAATACATGGCTCTCACGATGCTCTTCCTAGGGAAAGATCCCATCAGGCATCCGATATAGAGTATGAAAAGCTCAAGGCTGAGGTTACTGTTTTGGCAAGGCAGGTGGATGTGTCAGACATGGAACTTCAGACTCTTCGGAAACAAATCGTAAAGGAAAGTAAAAGAGGGCAGGAACTTACAAAGGAAGTTATCAGCTTGAAAGAGGAAAGAGATACACTCAAGATAGAATGCGAAAACTTCAAGTCTTTTCGCAAACGAAGGGACGATGCCAAAGTGAGTAGCAGGTCACTAATGGAAAGCGGGGATCTTCATACTCTTGTTGAAGAAATCAGACAAGAATTAAATCACGAGAAGGACATGAATGCAAATCTTAGACTACAGTTAAACAAGACACAGGAATCAAATGCTGAACTAGTTCTCGCTGTTCAGGATCTCGATGCAATGTTGGAGCAGAAAAATAGCGAAATACTTAGTCTTTCCAGTAATTACAAACAGACTAAAAACTCGCATGGTTTTGGGAGAAGCGTCTCTAATTGTGAAACAGATGATGATGAACAAAAGGAATTGGACGAGCTTGTTAAGAATCAGAACAGTCCCAAGGAGACACACTTACTCGAGAAAAAAATCACGGATCTCTACGGTGAAATAGAGATGTATAGGCGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAAATTTTGAAACAGGAAAACCATGACATTGCATATAAGCTGGAACAAAGCGAACTGCAAGAACAGTTAAAATTACAGTATGAATGCTCTCCTCCTCCTGGCATAGACGAATTTGAAACGCATATCCAGAATCTGGAAAATCAACTCAAGAAACAGTCGGAAGAATTCTCAAATTCTTTGGAAACCATCAAGTCTCTTGAGAACCAAATTCACATATTAGAGGAGGAACTGGAGAAACAAGCACAAGGATTTGAATCTGATTTAGATTCAGTGACACATGACAAGGTTGAGCAAGAGCAGAGAGCGATTCGAGCAGAGGAAGCTTTGCGATGCACCAGACTTAAAAATGCTAATACTGCAGAGAGGCTTCAAGACGAATTTAGAAAGCTATCAATGCAAATGGCCACGACATTTGAGGCAAATGAGACGGCCACCATGAGAGCGCTTAGGGAAGCAAGTGAACTTCGCGTGCAGAAAAAACTACTGGAGGAAATGCTGCGTAATGTCAAAGAAGAGCTTCAGTCAGTCAAAGCTGATTATGAAGTAAAAGTGAATGAACTTTCCGACAAAATAGATACCATGACAGTTCAGATGCAACAGATGTTGCTGGAAATTGATGACAAGTCCATGCAACTTGAGAATCAGAAAAAGCACGATGAACTTGTTGGCAGGGATTTCCAGTTGCTAAAAGCTGAGAATGAAAAGCTTACAGTGGAAATCTCATGCTTATCTGAGCAAGTAAAACAAAAAGAAGTCTCAAGTTCTGACTTGGAACTTATGAAGAAATCACTCGAGGAATATGAGACCCTCTTAAATACTCAAAAGGAAGAGAGAAACGAGCTTGTGAGTACAATTTCCCTGTTGAAGAAGGAAGCAGAACAGTCACTTGATGAGCTAAATAGGACGAGGCATCTCAAAGACGAAGAAGAGAAAGTGGGTAAACTCTTGCATTCAGAGTTAGAAGCACTTAAAGCTCAATATAGTGACCTGGAACGTTCTCATATTGATGATGAGACTGAGAAAGAAATACTAAGAAAGCAAATATTCCAACTTAACGGTGAACTGAAAAAGAAGGACGATGCATTAGCTGAAAAAAGTACTTTAATTTCTCAGAACTCCAAAGAAATGACAAACCTGAAAGAGAAAATACAAACGCTCAAGGACCAGATAAAGTCAAAAGATATTGCCTTGAAAAAATCAGCATCTTCACTTTTTGAGAAGGAAAGGGAGCTTCAATCCAAAATTGCGGAACTGGAGGACAAAGTGGAGGAACTCAATCAAAGCATCAAGGTTGCCGCGGATAGGAGTTTTACTACTACAAATGATACTTCATGCGCCTTGGATGAAAATGACGCGGTAGTGTCATCACTCAAGAGTCACGCACATTTGTCCGAGAAAGAAGCAGAAATACCAGTAGTGGGTAACAACGGCGATAACCGACTCAGTGATGTTTTAACTGAATTATCATCATTGAAAGAAAAAGACATCTCAATGAGAACTGAACTAAAAGAGTTACAAGAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAAGTAGAAGGTGAAAGACAAAAGCTTGTCATGACAGTAAGAAGCCTCAAGAACGCTAGGAAGCACTAA 3192 0.4016 MFRWRSEKNKVKAVFKLHFHVTQVVQSGVVDSLVLSIVPGDIGKPTTRLEKAVINNGVCKWENPVYETVKFIRDPKNGRFGERVYYFVISTGLSKASTFGDVSVDFADYAEATKISNVALPIKNSHSDAVLHVSIQRLQENNDKREEEECEDTKLKPNDKSLRTYLSNGDAVSQTKSDSSEISQDVSGNGNSERAGLSADCRTSSGSDVTLSSSDGSFGLDTPRELGLRNTSIHPTKIGVPSVTNHFSEAHKPAVNALSSLYDVHQRSSHFRDSSGGSEHGLSTEGSIHGSHDALPRERSHQASDIEYEKLKAEVTVLARQVDVSDMELQTLRKQIVKESKRGQELTKEVISLKEERDTLKIECENFKSFRKRRDDAKVSSRSLMESGDLHTLVEEIRQELNHEKDMNANLRLQLNKTQESNAELVLAVQDLDAMLEQKNSEILSLSSNYKQTKNSHGFGRSVSNCETDDDEQKELDELVKNQNSPKETHLLEKKITDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKLQYECSPPPGIDEFETHIQNLENQLKKQSEEFSNSLETIKSLENQIHILEEELEKQAQGFESDLDSVTHDKVEQEQRAIRAEEALRCTRLKNANTAERLQDEFRKLSMQMATTFEANETATMRALREASELRVQKKLLEEMLRNVKEELQSVKADYEVKVNELSDKIDTMTVQMQQMLLEIDDKSMQLENQKKHDELVGRDFQLLKAENEKLTVEISCLSEQVKQKEVSSSDLELMKKSLEEYETLLNTQKEERNELVSTISLLKKEAEQSLDELNRTRHLKDEEEKVGKLLHSELEALKAQYSDLERSHIDDETEKEILRKQIFQLNGELKKKDDALAEKSTLISQNSKEMTNLKEKIQTLKDQIKSKDIALKKSASSLFEKERELQSKIAELEDKVEELNQSIKVAADRSFTTTNDTSCALDENDAVVSSLKSHAHLSEKEAEIPVVGNNGDNRLSDVLTELSSLKEKDISMRTELKELQERYSEMSLKFAEVEGERQKLVMTVRSLKNARKH 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05857 1063 Coils Coil 559 618 - -
Vivi5g05857 1063 Coils Coil 329 363 - -
Vivi5g05857 1063 Coils Coil 893 920 - -
Vivi5g05857 1063 Coils Coil 676 728 - -
Vivi5g05857 1063 Coils Coil 394 421 - -
Vivi5g05857 1063 MobiDBLite consensus disorder prediction 269 302 - -
Vivi5g05857 1063 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 144 IPR019448 -
Vivi5g05857 1063 Coils Coil 781 833 - -
Vivi5g05857 1063 Coils Coil 925 959 - -
Vivi5g05857 1063 Coils Coil 844 864 - -
Vivi5g05857 1063 ProSiteProfiles C2 NT-type domain profile. 3 139 IPR019448 -
Vivi5g05857 1063 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1062 - -
Vivi5g05857 1063 MobiDBLite consensus disorder prediction 140 227 - -
Vivi5g05857 1063 Coils Coil 496 530 - -
Vivi5g05857 1063 MobiDBLite consensus disorder prediction 140 159 - -
Vivi5g05857 1063 MobiDBLite consensus disorder prediction 160 219 - -
Vivi5g05857 1063 Coils Coil 1012 1046 - -
Vivi5g05857 1063 Coils Coil 750 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05857 Vivi-Chr5 162655829 162660768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05857 - - gmx:100819574 1422.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05857 5 162655829 162660768 Vivi5g05857 5 162655829 162660768 ECH
Vivi2g03890 2 150827862 150832447 Vivi5g05857 5 162655829 162660768 PCT