LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g03890	ATGTTTCGTTCTGCAAAATGGAAGACTGAGAAAAACAGAATTAAAGCTGTTTTCAAACTTCAATTCAATGCCACTAAGGTGTTACAATCTGGAGTAGATGCATTGGTGTTGTCAATAATTCCTGGTGACATTGGAAGACCAACTAAGAGATTAGAGAAAGCTACGGTTCGAGATGGAAATTGTCGATGGGAGAATCCTGTCTACGAAACTGTCAAGTATTTTCAGGATCCTAAAACCGGGAAAATCGCCGATAAAATATATCGTTTTTTGCTATCAACGGGGTTATCAAAAGCTAGTGCGATCGGGGAGGTTTCGATGAACTTTGCTGATTATGTAGATGCCACGAAGCCCTCTTCGGTCTCTCTTCCCATCAAGATTCCTCATTGTGATGCTGTTTTGCATGTATCTGTCCAACGGATGCAAGAAAACAGTGATCAAAGAGAGAAAGATGAATGTGATGATAATGCAAAACAAAAATTCGATGATAGGAGCTTAAGGAACCAGTTAAACAACGGCGATACAGATGAAAGTACTAAGAGTTATTTTTCTGAAGATGTTTCTGCCAAAGCAATCATCGATAGGACGTCTAGTGGATCCGACATTACATTGTCGACAAGTTCTGATGACAGCTCTGGAGTTGATACTCCCTGTGATAATGGAGTGAGACAAACAAACATCAACACCACCACAAATCAGTTTGCTCCAGTTACGCACCGTGCCGCAGAATCTCCAAGCCGTGCTGTCAATACCTCGACAACAACGCATGATTTACAACAGAGATCACAATGGGGTTGGTCCTCTAGCTCAGAGCTCGGGTTAAGTATGGGCGATTCAACAAATGGTTCTCATAATGTCCTTTCAAAGGAAAGGTCGCAAGATGCGTCTCATTCGGAGATTGAGAGACTCAAGGCTGAACTTGCTGCTTTGGCGAGGCATGTGGATGTATCGGACATGGAACTACAGACTCTTAGGAAGCAAATTGTAAAGGAAAGCAAACGAGGGCAGGATCTCTCGAAGGAAATCATTATCTTGAAAGATGAAAGGGATGCTCTCAAGACGGAATGTGATAATATCAGGTCTTTCCATAAACGCATGGATGACGCCAAAGTGAGAAACAGGTCACAGTTGGAAAGTGGAGATGCTCATGCTTTCGTCGAGGAAATTAGACAAGAATTGAATTATGAGAAAGACACGAATGCAAATCTCCGATTACAGTTAAAAAAGATGCAAGAATCGAATGCTGAGTTGGTTCTTGCGGTGCAGGATCTTGAAGAAATGTTGGAGCAGAAAAATATGGATATGAGTAATCACTCCAATAAACACGAGTCGCGTAAAAATTCCCAAGATTTTGGGATGAAACTCTTAAAATGTGAAACAGATGATGATGAAGATCAGAAAGCATTGGATGAGCTTGTCAAGGAGAACAGTGATGCTAAGGAGACGCACTTGCTCGAGAAAAAAATTATAGACTTGTACGGTGAAATCGAAATGTATAGAAGAGACAAAGAGGAGTTAGAGATGCAGATAGAGCAGATTGCACTAGACTATGAGATATTAAAACAGGAAAACCACGGCATTGCGACTAAGCTAGAGCAAAGCCAACTGCAAGAACAGTTAAACATGCAATGTGATTGTTCGTCTCCTCCTGCTGCTATGAAAGACATTGAAAATCACATTGAGAATCTTGAAAAAGAACTCAAGGAACAGTCGGAAGATTTCTCTAATTCTCTAGCTACCATTAAGGTACTAGAAACCCATATCAGAAGATTGGAGGAGGAAATGGAGAAACAAGCACAGGGATTTGAGGCTGATATTGAAGCGGTGGCTCGTGAAAAAGTTGAGCAAGAGCAAAGAGCCATCCAAGCTGAGGAAACTTTGCGAAAGACCAGACTAAAAAATGCTAATACTGCTGAGAGGCTTCAAGACGAATTCCAGAGGCTCTCATTGCAAATGACTACTACCTTTGATGAAAACGAGAAGGCTACCATGAGAGCACTGACAGAAGCAAGTGAGCTGCGTCTACAGAAAAATCTAGTGGAAGGAATGCTTCTTAAAGTCCAGGAAGAGCTTGAGTCAATTAAAGCCGATTACGAGGTGAAACTGGCCGATCTTTCAAACCAAATGGATACGACGACAGTTCAGATACAGCAGATGTTGGTGGAAATTGAAGACAAGTCTAAGCAGCTAGAAAATCAGAAGAAGCTTGGGGAACAAGTTAATAGGGATTTCTCTGACGAGTTCGAGATGCTAAAATCTGAGAATGGAAAACTTAAAGTGGAAATAATGCAGATGTTGGTGGAAATTGAAGACAAGTCCAAGCAGCTTGAAAGTCAAAAGAAGCTTGGGGAACAAGTTAATAGGGATTTCTCTGAGGAGTTCGAGATGCTTAAAGCCGAAAATGAAAATCTTACAGCGGAGATTTCACGCTTAAATGAACAAGTAGAAGGAAAAGAAATCTTAAGAACTGACTTGGAACTTATGAAGAAATCTATCGAGGAATATGAAACACTGTTACATCAAGGAACTGTGGAAAGAAACGAACTTGTGAGCACAGTTGCATTATTGAAGAAGGAAGCGGAACATTCACTTAATGAGCTAAGTACGATCAGAAATCTCAAGGATGAAAAAGAAGAAGAGGCTAGACTCTTGAAGTCAGAGTTGGAAGCTATTAAAGCTCAATGCAGTGATTTGAAACAATCACTTTTTGAGGAAGAGGCTGAGAAAGAAAAACTAAGAAAGCAAATTTCTCAGCTAAAGAACGAAATAAAGAAGAAGAGTGATGCATTAACAAGTTTTGAGAAGAGGTTCCGGGATGGTAACGGCCGCAACCAACATTCTGATGGAACTAAAACCAATCCAATCAACAAAAGAACTGCTTCCAGTCCTCAGAATTCGAAAGAAATGGCAAGTCTCAGGGAGAAAATAAAAATGCTTGAGGGACTAATAAAATCAAAGGAAACTGCCCTGGAAACTTCTACACTTTCGTCTTTGAAGAAGGAAACGGAACTCCATAGTAGAATCGCTGAGCTTGAGAACAACCTGGAGGAATTAAATCGGAATGTTACTTTACATGAGGAAACAAGTATTACAAATTCAAATGAGATATCGGACGAGTTAAGAAATAGATTGGAAGATGCAGACAACAATCTTAGTAACGTGTTGAACGAATTGTCGTCATTGAAGGAAAGAAACAAATTAATGGAAAATGAACTCAAAGATATGCAAGAGAGATACTCAGAAATGAGTCTCAAATTTGCTGAGGTAGAAGGTGAAAGACAGATTCTTGTTATGACTGTAAGAAACCTCAAGAGTTTCCACAAAGGCTGA	3327	0.4019	MFRSAKWKTEKNRIKAVFKLQFNATKVLQSGVDALVLSIIPGDIGRPTKRLEKATVRDGNCRWENPVYETVKYFQDPKTGKIADKIYRFLLSTGLSKASAIGEVSMNFADYVDATKPSSVSLPIKIPHCDAVLHVSVQRMQENSDQREKDECDDNAKQKFDDRSLRNQLNNGDTDESTKSYFSEDVSAKAIIDRTSSGSDITLSTSSDDSSGVDTPCDNGVRQTNINTTTNQFAPVTHRAAESPSRAVNTSTTTHDLQQRSQWGWSSSSELGLSMGDSTNGSHNVLSKERSQDASHSEIERLKAELAALARHVDVSDMELQTLRKQIVKESKRGQDLSKEIIILKDERDALKTECDNIRSFHKRMDDAKVRNRSQLESGDAHAFVEEIRQELNYEKDTNANLRLQLKKMQESNAELVLAVQDLEEMLEQKNMDMSNHSNKHESRKNSQDFGMKLLKCETDDDEDQKALDELVKENSDAKETHLLEKKIIDLYGEIEMYRRDKEELEMQIEQIALDYEILKQENHGIATKLEQSQLQEQLNMQCDCSSPPAAMKDIENHIENLEKELKEQSEDFSNSLATIKVLETHIRRLEEEMEKQAQGFEADIEAVAREKVEQEQRAIQAEETLRKTRLKNANTAERLQDEFQRLSLQMTTTFDENEKATMRALTEASELRLQKNLVEGMLLKVQEELESIKADYEVKLADLSNQMDTTTVQIQQMLVEIEDKSKQLENQKKLGEQVNRDFSDEFEMLKSENGKLKVEIMQMLVEIEDKSKQLESQKKLGEQVNRDFSEEFEMLKAENENLTAEISRLNEQVEGKEILRTDLELMKKSIEEYETLLHQGTVERNELVSTVALLKKEAEHSLNELSTIRNLKDEKEEEARLLKSELEAIKAQCSDLKQSLFEEEAEKEKLRKQISQLKNEIKKKSDALTSFEKRFRDGNGRNQHSDGTKTNPINKRTASSPQNSKEMASLREKIKMLEGLIKSKETALETSTLSSLKKETELHSRIAELENNLEELNRNVTLHEETSITNSNEISDELRNRLEDADNNLSNVLNELSSLKERNKLMENELKDMQERYSEMSLKFAEVEGERQILVMTVRNLKSFHKG	1108

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g03890	1108	MobiDBLite	consensus disorder prediction	198	298	-	-
	Vivi2g03890	1108	MobiDBLite	consensus disorder prediction	945	968	-	-
	Vivi2g03890	1108	MobiDBLite	consensus disorder prediction	141	169	-	-
	Vivi2g03890	1108	MobiDBLite	consensus disorder prediction	198	288	-	-
	Vivi2g03890	1108	Coils	Coil	859	935	-	-
	Vivi2g03890	1108	Coils	Coil	786	837	-	-
	Vivi2g03890	1108	PANTHER	MYOSIN HEAVY CHAIN-RELATED PROTEIN	1047	1104	-	-
	Vivi2g03890	1108	MobiDBLite	consensus disorder prediction	140	180	-	-
	Vivi2g03890	1108	Coils	Coil	488	522	-	-
	Vivi2g03890	1108	ProSiteProfiles	C2 NT-type domain profile.	6	141	IPR019448	-
	Vivi2g03890	1108	Coils	Coil	968	988	-	-
	Vivi2g03890	1108	Coils	Coil	552	632	-	-
	Vivi2g03890	1108	Pfam	N-terminal C2 in EEIG1 and EHBP1 proteins	11	145	IPR019448	-
	Vivi2g03890	1108	Coils	Coil	687	739	-	-
	Vivi2g03890	1108	MobiDBLite	consensus disorder prediction	933	968	-	-
	Vivi2g03890	1108	Coils	Coil	385	440	-	-
	Vivi2g03890	1108	Coils	Coil	1029	1091	-	-
	Vivi2g03890	1108	Coils	Coil	1000	1027	-	-
	Vivi2g03890	1108	Coils	Coil	758	778	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g03890	Vivi-Chr2	150827862	150832447	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g03890	-		-	cam:101499947	1461.43

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi2g03890	2	150827862	150832447	Vivi5g05857	5	162655829	162660768	PCT