Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05723 ATGGATCTTTCAAAATTGAGTTTATTAGGGTTTCTTTCCGCTGCTTTTCTCTTTACAGTTAATGCCGTGGAACTTCACAGGAATCAACCTACTGAGAGAATCTCAGGCAGTGCTGGTGATGTATTGGAAGATGATCCGGTTGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCGAGTAAATATAATAAGAAAATTTTGCAGAAAGACCCGAGATGTCTCGCGCATATGTTTGCTGCTGAGATATTTATGCACCGGTTTCTGTTATCGAGTGCTGTTCGGACTTTTAATCCGGAAGAGGCGGATTGGTTTTATACTCCTGTTTATACAACCTGTGACTTGACTCCAAATGGGCTGCCTTTACCGTTTAAGTCACCACGAATGATGCGGAGTGCTATTCAGCTTGTTTCTTCGAATTGGCCTTATTGGAATCGGACTGAGGGGGCCGATCATTTCTTCGTGGTTCCTCATGACTTCGGGGCGTGTTTTCATTACCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTTCAATGCTAAGGCGTGCTACGTTGGTTCAAACATTTGGTCAGAGAAATCATGTGTGCTTGAAAGAGGGCTCAATTACCGTTCCTCCATATGCTCCACCTCAGAAAATGCATTCCCACTTGATTCCTGATAAGACTCCCAGGTCCATTTTTGTGTACTTCCGAGGATTGTTTTATGATGTGGGAAATGATCCTGAAGGTGGATACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAATTTTAAGAACAATCCACTATTTGACATTTCTACGGAGCATCCAACAACATATTACGAGGACATGCAACGAGCTGTGTTTTGTCTATGTCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCTGTGGTATTTGGTTGCATTCCTGTTATTATTGCAGATGATATTGTTCTTCCGTTTGCCGATGCAATACCGTGGGAAGAGATCGGGGTGTTTGTTGATGAGCAAGATGTTCCTAAGTTGGATACCATACTCACATCGATCCCACCAGAAGTTATATTAAGGAAACAAAGATTGCTTGCTAACCCTTCCATGAAACAAGCAATGCTATTCCCTCAACCCGCGCAACCTGGAGACGCTTTCCATCAAGTTCTAAACGGACTTGCACGGAAGTTGCCGCATGACAGGAGTGTATTCTTGAAACCAGGGGAGAAGAGCTTGAATTGGACTGCTGGCCCTGTCGGCGACCTTAAACCTTGGTAA 1251 0.4412 MDLSKLSLLGFLSAAFLFTVNAVELHRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLAHMFAAEIFMHRFLLSSAVRTFNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLVSSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILSMLRRATLVQTFGQRNHVCLKEGSITVPPYAPPQKMHSHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDRSVFLKPGEKSLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05723 416 Pfam Exostosin family 49 344 IPR040911 -
Vivi5g05723 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 383 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05723 Vivi-Chr5 160704765 160706919 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05723 K20870 - gmx:100812747 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05723 5 160704765 160706919 Vivi5g05723 5 160704765 160706919 ECH
Vivi5g05723 5 160704765 160706919 Vivi3g02333 3 39309827 39315141 PCT