Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02333 ATGAAACCTTCTTCTCACAAGTGTTTCTCTTCTCAATTTTTGTCTCTCTTCTTCACACTTGCATTAGCTACACTAGTTCTTGTTTCTTATTGGACTCATTCTCCACATTTCTCATCATTTCTTCTTCCAACACATGAAGATGAAGAAGCTCCATCAGCCACTGCATTTCCATTACAAACCTTTGCTTCATATGGTTCTTATGATGATGAAAAGCTTGACACAAACTTTAAGCATAAAGTTACAAACAAAGAGAACCTTAGAGATCATAAACACAGCAACTTGGAAAGAATTGAATCAAAATTGGCTAAAGCAAGATATTCCATCAAAGAAGCCAGCAAAGTTCGAAATTCGACATCTACCCACCAAGATCAAGAATATGTTCCTCATGGCCCGATTTACAGAAACGCCAACGCTTTTCATAGGAGTTACCTAGAGATGGAAAAGGTGTTCAAGATTTTCGTGTACGAGGAAGGAGAGCCACCGATGTTTCACCATGGTCTAAGCAAAGACATATACTCATCCGAAGGAATGTTCATAAACGAAATGGAAAAGGGAAGATACTACAGAACATATGATCCAAATGAAGCTTTTGTGTATTTTCTACCTTTCAGTGTGGTTATGATGATTGAGTATCTCTACGTGCGAGGCACCTATGATCGAACTCCGTTTGGTCTTTGTGTAAAAGACTATATACAGATTATATCTCATAAATATCCATTCTGGAATCAATCTCAAGGCCATGATCATTTCATGCTCTCTTGCCATGATTGGGGACCAAGTGTATCCGCTTATGTCGATAACTTGTTCAACAAGTCAATAAGGGTGCTCTGCAATGCTAATACATCAGAAGGATTCAAACCAGAAAAAGATGTACCATTCCCTGAAATGAATCTCAGGACAGGACATCTCACAAATCTAGTAGTACAAGGGTACCCTCCATCTCATAGGACAATCCTTGCTTTCTTTGCAGGTCATTGGCATGGTAACATAAGATACTTACTCCTCAATGCATGGAAAAACAAAGACAAAGATGTTCAAGTTTTCGATGAACTTCCTGACGAAGAATCTTATCAGACTAAGCTTAGAAGCAGTAAGTTTTGTTTGTGTCCAAGTGGTTATGAGGTGGCTAGTCCGAGAATTGTGGAAGCTATATTTGCAGAATGTGTGCCTGTGTTGATTTCTAATAGCTATGTTCCACCTTTTAGTGATGTTTTGAATTGGAAATCATTTTCGGTTCAAATAGATGTGAAGGAAATTCCTAATATTAAGAAGATACTCATGGGAATTTCGCAGAGAAGGTACTTGATGATGCAGAGGAGAGTAAAACAAGTGCAAAGGCATTTTGTTCCTAATGAGCCACCAAAAAGGTTCGATATTTTTCATATGACTATTCATTCTATTTGGCTTAGAAGGTTGAACATCCGTATTCATGATTACGACAAGTGA 1446 0.3797 MKPSSHKCFSSQFLSLFFTLALATLVLVSYWTHSPHFSSFLLPTHEDEEAPSATAFPLQTFASYGSYDDEKLDTNFKHKVTNKENLRDHKHSNLERIESKLAKARYSIKEASKVRNSTSTHQDQEYVPHGPIYRNANAFHRSYLEMEKVFKIFVYEEGEPPMFHHGLSKDIYSSEGMFINEMEKGRYYRTYDPNEAFVYFLPFSVVMMIEYLYVRGTYDRTPFGLCVKDYIQIISHKYPFWNQSQGHDHFMLSCHDWGPSVSAYVDNLFNKSIRVLCNANTSEGFKPEKDVPFPEMNLRTGHLTNLVVQGYPPSHRTILAFFAGHWHGNIRYLLLNAWKNKDKDVQVFDELPDEESYQTKLRSSKFCLCPSGYEVASPRIVEAIFAECVPVLISNSYVPPFSDVLNWKSFSVQIDVKEIPNIKKILMGISQRRYLMMQRRVKQVQRHFVPNEPPKRFDIFHMTIHSIWLRRLNIRIHDYDK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02333 481 Coils Coil 94 114 - -
Vivi3g02333 481 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 28 467 IPR004263 GO:0006486|GO:0016757
Vivi3g02333 481 Pfam Exostosin family 147 427 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02333 Vivi-Chr3 39309827 39315141 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02333 - - aprc:113868893 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02333 3 39309827 39315141 Vivi3g02333 3 39309827 39315141 ECH
Vivi5g05723 5 160704765 160706919 Vivi3g02333 3 39309827 39315141 PCT