Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04653 ATGGCAATGGCACTGAGTAGTAGCAGTAGAAGAAGAAAGAGAGTTGAATCGGCGTTACTCCTTTTCTTCTGTCTGTTTCTCTGCTCCTTTTTGGATCTGGTAACTGCACATCAAGGCCACTCCCATTCTGAATCGAATAGTGATATCCATCATCATCACTGTGATGGTGGTCATGACCATCACCATGGTCATCACCATGATCATGATCATCATGGTCATGGCGATGTTCATCAGTCGAAGCTTCCGGAGGAGTTAGCGGAAGAGGAGGATATGAAACTCTACGGGTTTGGTTTACCACATCACAACCTTCACTTTGCTGCCTCCGCTGATCTATCGGGTTTAGGCCTTTGGTTGAATGCATTGGGCTGTTCATTTCTGGTGAGCATGGCTTCCCTGATTTGCCTCATTCTCCTGCCTGTAATTTTTGTTCAAGGAAAACCATCAAAGGCTGTTGTTGATTCATTGGCTTTATTTGGGGCAGGAGCTATGTTGGGGGATGCTTTTCTTCACCAACTACCACACGCTTTTGGTGGTGGACATTCCCATTCTCATAGCGACCATGCAGACCATGACCATGACCATGATGCTAGTTCTGGACATGGACATTCACATTCCTTAGCTGATCTTTCTACAGGATTGTCAATCCTAGCTGGAATTGTACTCTTTCTTCTTGTGGAAAAGCTAGTGAGGTATGTTGAAGAAAACTCTGGAGGAGCTAATTCGTGGGGGCATGGACACCACCACCATAACCACAACAGCAAGAAAAAATTGAAAGATGATAATAATTCTGATGTCAAGAATCAGTCACAGTCTATCAAAACAAAAAAAGAGAGATTGTTAGATGAGGGGAAAAAAGACAATCAGGTATCACAAGAATCATTGAAGGGAGATAAGCTAGCTCAAACTGAATCTCTTAGAAAGAGAATTGGAGGCAATACAACTAAAGATAATAGTCTCAATGATAATGCTGAAGATAGCTCCAGTGATAATATCAAATCTTCAATTGTTAAAGAACCAGTTAAACCAGCTAGTAGTCTTGTGTTTGGCTATCTCAATCTTTTCTCTGATGGAGTTCATAATTTCACTGATGGAATTGCATTAGGAAGTGCATTCATGCTTTATGGATCAGTTGGTGGCTGGTCTAGAACTTTGTTTTTGTTGGCACATGAAATTCCTCAAGAGGTTGGTGATTTTGGTATTTTGATTAGATCTGGTTTCAGCATACCAAAAGCTTTGTTCTTCAACTTTTTATCAGCACTTGTGGCACTTGCAGGCACTGCATTGGCTTTGCTCTGGGGGAAAGATCCTGGGCAGTCATCCCTGATTGAGGGATTTACAGCAGGTGGATTTATATACATAGCCATTGCAGGAGTTCTTGCAGAAATGAATAACAATGGGAAGACGACGTTTAGAAGTACAGCCGTCCATATAATCTCACTGACAATGGGCATGGCTGTTGCCCTTGGCATCTCCCTTATAGAATGA 1485 0.4215 MAMALSSSSRRRKRVESALLLFFCLFLCSFLDLVTAHQGHSHSESNSDIHHHHCDGGHDHHHGHHHDHDHHGHGDVHQSKLPEELAEEEDMKLYGFGLPHHNLHFAASADLSGLGLWLNALGCSFLVSMASLICLILLPVIFVQGKPSKAVVDSLALFGAGAMLGDAFLHQLPHAFGGGHSHSHSDHADHDHDHDASSGHGHSHSLADLSTGLSILAGIVLFLLVEKLVRYVEENSGGANSWGHGHHHHNHNSKKKLKDDNNSDVKNQSQSIKTKKERLLDEGKKDNQVSQESLKGDKLAQTESLRKRIGGNTTKDNSLNDNAEDSSSDNIKSSIVKEPVKPASSLVFGYLNLFSDGVHNFTDGIALGSAFMLYGSVGGWSRTLFLLAHEIPQEVGDFGILIRSGFSIPKALFFNFLSALVALAGTALALLWGKDPGQSSLIEGFTAGGFIYIAIAGVLAEMNNNGKTTFRSTAVHIISLTMGMAVALGISLIE 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04653 494 Coils Coil 262 282 - -
Vivi5g04653 494 MobiDBLite consensus disorder prediction 42 81 - -
Vivi5g04653 494 MobiDBLite consensus disorder prediction 306 333 - -
Vivi5g04653 494 MobiDBLite consensus disorder prediction 180 201 - -
Vivi5g04653 494 Pfam ZIP Zinc transporter 115 490 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi5g04653 494 MobiDBLite consensus disorder prediction 179 203 - -
Vivi5g04653 494 MobiDBLite consensus disorder prediction 237 333 - -
Vivi5g04653 494 PANTHER ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 35 493 - -
Vivi5g04653 494 MobiDBLite consensus disorder prediction 270 292 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04653 78 443 Organic Solute Cotransporters AT1G68100 62.803 7.02e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04653 K14713 - gmx:100816483 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03324 3 56124366 56126721 Vivi5g04653 5 145178066 145185298 PCT