Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04577 ATGGGGGGTCTTTGTTCTAAGTCTGGTAAAGGTGACAAGAGGGTTGCAAAGAGGGAAGAACATTATGGTGATGGGAATCACAAGAAGGGTGGTGATTTGGTGAGTGTGAAGGAAGAAGAAGGTGCTGTTGTTGTTGCTGATGGGATTGGGAGTGATGAGTTCTATGATGGGATTCCACGCTATGCTGATTCTTTTTCACATAAGTCTAGGTCTGTTAGATCAAGACAAGCTGCTGTGGCTAAGGTCTCGGAGGTGGGTTCACGTCTGGGGAGAGCTGGCACTATTGGATTCGGAAAAGCAGTAGATGTTCTGGACACACTTGGGAGTAGCATGACGAATTTAAATTCTGGTGGCGGCTTTGCATATGGAGCTGTAACAAAGGGGAATGAAGTTGGCATTTTAGCATTTGAAGTTGCAAACACTATTGTCAAGGGTTTTAGTCTCATGGAATCTCTATCGACAAAAAACGTTAAACATTTGAAAGAAGAAGTGCTTAAGTTAGAGGCTGTGCAAGATTTAGTTTCAAAGGATATGGACGAACTTCTACGGATTGTTGCTGCAGACAAAAGGGATGAATTGAAGGTCTTTTCGGATGAGGTGATTCGATTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTGGATCGATACTTTGAGAAAATTAGCAGAGAACTTAATTCTCAAAGACAAACAAAGGAGGAGGCGGAATTATTAATGCAGCAATTGATGAATTTAGTTCAACATACGGCGGAATTATACCATGAGTTACATGCTTTGGATAGATTTGCGCAAGATTATCAGCATAAGCGTGAAGAGGAGGACAATTCAAGTGCAGCTCAAAGCGGTGACAGTCTTGCAATCTTGAAGGCAGAACTTAAAAGTCAAAAGAAGCAAGTTAGGCATTTGAAGAAAAAGTCACTCTGGTCCAGAAGTTTGGAAGAGGTTATGGAGAAGCTTGTAGATATAGTCCACTTTTTACATTTGGAGATAAATAAAGCCTTTGGTAGTGAAGATAACCGTAAACCTTTAATTCAAACCATCAGTAATCGCCAAAAGTTGGGTCCTACAGGCCTCTCTTTGCATTACGCAAATATAGTGCTCCAAATGGATACTCTAGTTGCCAGATCCGCTTCTATGCCCGCAAATACAAGAGATACATTATATCAGAGCTTGCCTCCTAATATTAAATTAACGCTGCGTTCCAAATTACCTGCATTTCATGTTGCAGAAGATCTCACTGTAGCAGATATTAAAAAGGAGATGGAGAAAACATTGCATTGGATGGTTCCAATTGCTACAAACACAGCCAAAGCTCATCATGGTTTTGGTTGGGTCGGGGAATGGGCAAGCACCGGATCTGATCTAAACAAGAAAACGATGAAGACTGATGTAATGCGGATTGAAACATTTCATCATGCAGATAAAGAAAAAGTAGAAAACTATATTCTCGAGCTTCTTCTGTGGCTTCACCGCTTGGCAGTTAAAAGTAAAGCCGGGGTTGATGTTGGAGAAATAAAGCCTGCCGTCAAGTCTCATGTCGGTACTGTCTTGCAAAAGACAAATCAACAATCGGCAAATGCAGTATCGCCATTGCTCACAACTGATGAGCAGATCATGCTGAAGGATGTAAGTAACAAAATGCGTGTTAGAGGGATCAGTAAAAGTAAAAGCTTGGACTTTGACAGTTTGAAGACGGCGTCGACAGATAGTAACAGACTTATCAAAAGTAGCAGTTACTCAACAACAAGTAGAAGCAAAGAATCATCTTATAACAGAATTTGCTCTAAGGTTCCTGTGATTGATTTTCATATTGACAAAAAGAGAGCATTGGATGTGATTGACAGAGTAAATGTGACTAGATAA 1866 0.4073 MGGLCSKSGKGDKRVAKREEHYGDGNHKKGGDLVSVKEEEGAVVVADGIGSDEFYDGIPRYADSFSHKSRSVRSRQAAVAKVSEVGSRLGRAGTIGFGKAVDVLDTLGSSMTNLNSGGGFAYGAVTKGNEVGILAFEVANTIVKGFSLMESLSTKNVKHLKEEVLKLEAVQDLVSKDMDELLRIVAADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISRELNSQRQTKEEAELLMQQLMNLVQHTAELYHELHALDRFAQDYQHKREEEDNSSAAQSGDSLAILKAELKSQKKQVRHLKKKSLWSRSLEEVMEKLVDIVHFLHLEINKAFGSEDNRKPLIQTISNRQKLGPTGLSLHYANIVLQMDTLVARSASMPANTRDTLYQSLPPNIKLTLRSKLPAFHVAEDLTVADIKKEMEKTLHWMVPIATNTAKAHHGFGWVGEWASTGSDLNKKTMKTDVMRIETFHHADKEKVENYILELLLWLHRLAVKSKAGVDVGEIKPAVKSHVGTVLQKTNQQSANAVSPLLTTDEQIMLKDVSNKMRVRGISKSKSLDFDSLKTASTDSNRLIKSSSYSTTSRSKESSYNRICSKVPVIDFHIDKKRALDVIDRVNVTR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04577 621 Coils Coil 286 306 - -
Vivi5g04577 621 PANTHER OS01G0873900 PROTEIN 1 618 IPR045021 GO:0045927
Vivi5g04577 621 MobiDBLite consensus disorder prediction 10 32 - -
Vivi5g04577 621 Coils Coil 219 246 - -
Vivi5g04577 621 MobiDBLite consensus disorder prediction 1 32 - -
Vivi5g04577 621 Pfam Domain of unknown function (DUF3475) 133 189 IPR021864 GO:0045927
Vivi5g04577 621 Pfam Protein of unknown function (DUF668) 354 438 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04577 Vivi-Chr5 144009919 144014733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04577 - - gmx:100804075 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04577 5 144009919 144014733 Vivi5g04577 5 144009919 144014733 ECH
Vivi5g04577 5 144009919 144014733 Vivi3g02339 3 39409316 39418949 PCT