Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02339 ATGGAAACCGGTGCGAATTCAAAGATTCAATTATTGGTTTGGTTTTCTCAACTCATGGGAGGTCTTTGCTCTAGGTCCGCCGAAGTTGACCGCGTCTTCGCCAGCTCCGATGCCGATTCCGATGCCTCTCATAAACCTAATACTAACAACAACAACAACCCCGCTGATTTCACAAGGCCGCCTCAAGTACGTGAGATCATGGAGAGAAATCCCGCCGGAGGCACCGCTGATGACGTTTTCTACGACGGAATCCCACGCTACGCCGCTAAAGTGTCGGAGGTGAGTTCACGTTTGGGAAGAGCTGGATTGGGGAAGGCGGTGGAGGTTTTGGACAATCTTGGGAGCAGCATGGCAAATTTAAATGCTGGGAGTGGGTTTGTTTCCGGAGCTGCAATAAAGGGGAGTGAAATTTCCATCTTAGCATTTGAGGTTGCAAATACTATTGTCAAAGGTTATCAGCTTCTGCATTCTCTTTCCACAAAGAGTATTAGGCATCTAAATAAAGAGGTGCTTCTTTCAGAGGTTGTGCATGATTTAGTGTCAAAGGATACAGATGAGCTTCTTAGGATTGTTGCTGCAGACAAGAGGCAGGAGTTGAAAGTTTTTTCTAACGAGGTGATTCGTTTTGGAAATCGGTCAAAGGATCCTCAATGGCACAACTTAGACCGTTACTTTGAGAAGATTAGCAAAGAGTCAAATGCTCAAAGACTCTCAAGAGACGAGGCAGAATCAATAATGAAACAATTGATGAATTCAGTCCAATTTACAGCGGAGTTGTACCACGAACTTCATGCGTTGGATAGATTTGAACAAGATATTGAGCATAAGGGCGAAGAGGAGGATCAAAGAGGTGATAACCTCGCATTCTTGAGAGCAGAAATTAAAAGTCAAAAGAAGCAAATTAAACATTTAAAGAAAAAATCACTCTGGTGTAGAAGTTTGGAGGAGGTTGTTGAGAAGCTTGTAGACATCGTCCATTTTTTACATTTGGAGATAAGCAATAACTTTGGGAGTGCAGATGGCCAAAAGCCAATAATTGGAAACATTGGCAATCGTCAAAGATTGGGCCCTGCAGGTCTTGCTTTGCATTATGCAAATATAGTACTTCAAATTGATACCCTTGTAGCCAGGTATATTGCTATGCCTGCAAATACAAGGGACACATTGTATCAAAACTTGCCTCCTAATATAAAATCAGCTTTGCGTTCCAAATTATCATCCATTCATGTTGTAGAAGAGATAACTGCAGCAAATATCAAAGATGAGATGGAGAAAACATTACATTGGTTGGTCCCAATTGCCACAAACACATCCAAAGCACACCATGGTTTTGGCTGGGTGGGGGAGTGGGCTAACACAGGCTCTGAGGTGGATAAGAAAGTTTTCCAGGGTGGTGCAATGCGAATTGAGACATTCCACTATGCTGATAAAGACAAAGTAGAACATTATATTCTTGAACTTCTCTTATGGCTTCACCGCCTGGCCATTAAAGTAAAGTCTGGCAGTGATGCTGGCAAAGCAAGGCCTACCATGAAATCCCCTGTCGGGGCTACCATGGAAAAGACAAATAAGCATTCTACAAATGCCCTCTTACCAATTTTAACAATGGATGAGCAGAACCTGCTGCAAGATGTAAGTAAGAAAACCAAAATGAAAGGAATCAGTAAGAGCCTGGACTTTGACAGTCTGAAGCCTACATTGAGTGAGAAGTGCAGACTGACCAAGAGCAGTAGTCTTTCAACAAGTAAAAGCAAGGGATTATCTTTTAATAGGATTTTGTCAAAAGTTCCTGTGATTGATTTCGATATTGACAAAGAGCGAGCGTTAAACGTGATCGACAGACTAGATGTGGTCAGATAA 1860 0.4237 METGANSKIQLLVWFSQLMGGLCSRSAEVDRVFASSDADSDASHKPNTNNNNNPADFTRPPQVREIMERNPAGGTADDVFYDGIPRYAAKVSEVSSRLGRAGLGKAVEVLDNLGSSMANLNAGSGFVSGAAIKGSEISILAFEVANTIVKGYQLLHSLSTKSIRHLNKEVLLSEVVHDLVSKDTDELLRIVAADKRQELKVFSNEVIRFGNRSKDPQWHNLDRYFEKISKESNAQRLSRDEAESIMKQLMNSVQFTAELYHELHALDRFEQDIEHKGEEEDQRGDNLAFLRAEIKSQKKQIKHLKKKSLWCRSLEEVVEKLVDIVHFLHLEISNNFGSADGQKPIIGNIGNRQRLGPAGLALHYANIVLQIDTLVARYIAMPANTRDTLYQNLPPNIKSALRSKLSSIHVVEEITAANIKDEMEKTLHWLVPIATNTSKAHHGFGWVGEWANTGSEVDKKVFQGGAMRIETFHYADKDKVEHYILELLLWLHRLAIKVKSGSDAGKARPTMKSPVGATMEKTNKHSTNALLPILTMDEQNLLQDVSKKTKMKGISKSLDFDSLKPTLSEKCRLTKSSSLSTSKSKGLSFNRILSKVPVIDFDIDKERALNVIDRLDVVR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02339 619 Pfam Protein of unknown function (DUF668) 354 438 IPR007700 GO:0045927
Vivi3g02339 619 Coils Coil 287 307 - -
Vivi3g02339 619 MobiDBLite consensus disorder prediction 40 58 - -
Vivi3g02339 619 MobiDBLite consensus disorder prediction 36 62 - -
Vivi3g02339 619 Pfam Domain of unknown function (DUF3475) 139 195 IPR021864 GO:0045927
Vivi3g02339 619 PANTHER OS01G0873900 PROTEIN 58 616 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02339 Vivi-Chr3 39409316 39418949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02339 - - gmx:100808760 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04577 5 144009919 144014733 Vivi3g02339 3 39409316 39418949 PCT