Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04574 ATGAACTCCAGCAATCTGATTGGGTTCGTCTTGGCAGTTGTTTCCAGTTCTTTCATTGGTTCCAGTTTCATCATCAAGAAAAAGGGTCTCCAACTCGCTAGAGTCAACGGTCCTAGTGCCAGTGTTGGTGGCTATGGTTATTTGCTTCAGCCTCTTTGGTGGGTCGGAATGGTTACCATGATTGTTGGAGAGATAGCGAATTTCGTAGCGTATATTTATGCTCCTGCTGTTCTTGTCACTCCTTTAGGTGCTTTGACTATTATCGTTAGTGCTGTCTTGGCACATTTTGTTTTGAAGGAAAAGTTACAAAAAATGGGCATGCTGGGGTGTCTTATATGCATTATGGGGTCCACTATTATTGTACTCCATGCACCGCAAGAGATGTCGCTTACTTCTGTACATCAGATATGGAAGTTGGCCATTCAACCTGCATTTCTCATGTACACGGCCTCTGCAATTGCCTTAACATTGTTCTTGGTTTTGTATTGTGCTCCTCGCTATGGCCAAACTAATATTTTGGTTTATATTGGAATTTGCTCTATAATTGGGTCTTTAACTGTTATGAGCGTAAAAGCGATTGGCATTGCAATAAAACTTACACTAGAAGGTGCAAACCAGGTTTTCTATTTTCAGACATGGATTTTTACAATGGTTGCTATCACTTGTATCATTGTCCAACTTAATTACCTTAATATGGCGTTGGATAACTTTAACACAGCAGTTGTTTCTCCAATCTATTATGCATTGTTCACAGCTTTTACAATATTAGCCAGTGCAATTATGTTTAAGGACTATTCTGGTCAAAGCATAGGTAGTATTGTATCAGAGCTATGCGGTTTCATAACTATTTTATCTGGAACATTTCTATTGCATAGTACAAGAGAGCCAGATCCTCCAGTCAATCCAGATTTATATTCACCACTGTCTCCAAGAGTAGCATGGTTTATCCAAGGAAACAATGAATCCTGGAAACAAAAGGAGGAAGATGTATCGCCATTTAATTTAATAGCAGTTATACGGCAAGATCATTTCAAGTGA 1038 0.3911 MNSSNLIGFVLAVVSSSFIGSSFIIKKKGLQLARVNGPSASVGGYGYLLQPLWWVGMVTMIVGEIANFVAYIYAPAVLVTPLGALTIIVSAVLAHFVLKEKLQKMGMLGCLICIMGSTIIVLHAPQEMSLTSVHQIWKLAIQPAFLMYTASAIALTLFLVLYCAPRYGQTNILVYIGICSIIGSLTVMSVKAIGIAIKLTLEGANQVFYFQTWIFTMVAITCIIVQLNYLNMALDNFNTAVVSPIYYALFTAFTILASAIMFKDYSGQSIGSIVSELCGFITILSGTFLLHSTREPDPPVNPDLYSPLSPRVAWFIQGNNESWKQKEEDVSPFNLIAVIRQDHFK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04574 345 PANTHER UNCHARACTERIZED 3 296 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vivi5g04574 345 Pfam Magnesium transporter NIPA 5 295 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vivi5g04574 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04574 Vivi-Chr5 143964669 143970394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04574 K22733 - gmx:100799756 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04574 5 143964669 143970394 Vivi3g02341 3 39424118 39429057 ECH
Vivi5g04574 5 143964669 143970394 Vivi5g04574 5 143964669 143970394 ECH
Vivi5g04574 5 143964669 143970394 Vivi3g02341 3 39424118 39429057 PCT