Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02341 ATGTACTCCAGCAATTTGATTGGGTTCATATTGGCCGTTGTTTCCGGAGCTTTCATAGGTTCCAGTTTCATTATCAAGAAAAAAGGTCTCCAACGTGCCGGCCTTAACGGCACTCCTGCTAGTGTTGGAGGATATGGTTATCTTCTTCAGCCTCTTTGGTGGATCGGAATGGTTACAATGATTGTTGGAGAGATTGCGAATTTTGTAGCATACATTTATGCCCCTGCTGTGCTTGTTACGCCACTCGGTGCTTTGAGTATTATTGTTAGTGCTGTGTTGGCTCATTTCATGTTGGGTGAGAAATTACTGAAAATGGGCATGCTTGGGTGTCTTTTATGCATTGTTGGATCTACTGAGATCGTGCTCCATGCACCCCAAGAAAGGTCTCTTAGTTCTGTATTGGAGATATGGCTTTTGGCTGTTCAACCAGCATTTCTCTTGTACATAGCCGCGGCAATGGTTGTGTCATTCTTTTTGATTTTTTACTGCGCACCTCGCTACGGCCAAACTAATATCTTTGTTTATATTGGAATATGCTCCATAATTGGATCATTGACTGTCATGAGTGTTAAAGCAATTGGCATTGCCATTAAACTGACATTAGATGGTTCAAATCAGTTTGTCTACTTTCAAACATGGATTTTTATAGTGGTCGGCATTTCCTGCATCGTTACAAATTTAAATTACCTTAATATGGCATTGGATACTTTCAACACAACAGTCGTTTCTCCAATCTATTATGCATTGTTCACTTCTTTTACAATATTAGCCAGCGCAATCATGTTTAAGGACTACTCAGGACAAAGTATAAGCAGTATTGCATCAGAGCTATGTGGTTTCATCACTGTTTTATCCGGAACAACGGTTTTGCATTGTACTAGAGTACCAGATCCTCCAGTAAGTTCAGATGTGTACAGTCCCCTGTCTCCAAAAGTATCATGGTATATCCAACAAGGAAATGGCGAACCCTGGAAACAGAAGGAAGAAGATGGACCGCCCCTTAATTTAATTACGATTATCCAGCAAGACCATTTCAAGTGA 1041 0.4063 MYSSNLIGFILAVVSGAFIGSSFIIKKKGLQRAGLNGTPASVGGYGYLLQPLWWIGMVTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLGEKLLKMGMLGCLLCIVGSTEIVLHAPQERSLSSVLEIWLLAVQPAFLLYIAAAMVVSFFLIFYCAPRYGQTNIFVYIGICSIIGSLTVMSVKAIGIAIKLTLDGSNQFVYFQTWIFIVVGISCIVTNLNYLNMALDTFNTTVVSPIYYALFTSFTILASAIMFKDYSGQSISSIASELCGFITVLSGTTVLHCTRVPDPPVSSDVYSPLSPKVSWYIQQGNGEPWKQKEEDGPPLNLITIIQQDHFK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02341 346 PANTHER UNCHARACTERIZED 4 295 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vivi3g02341 346 Pfam Magnesium transporter NIPA 5 294 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vivi3g02341 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02341 Vivi-Chr3 39424118 39429057 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02341 K22733 - gmx:100783541 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04574 5 143964669 143970394 Vivi3g02341 3 39424118 39429057 ECH
Vivi3g02341 3 39424118 39429057 Vivi3g02341 3 39424118 39429057 ECH
Vivi5g04574 5 143964669 143970394 Vivi3g02341 3 39424118 39429057 PCT