Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04463 ATGGTGAGGCTTTTAGGGTTCGCTCGTGGTTATGCAGATGAACCCAGGGAGATTGAGTCGAAGTCAAACCTGACCGGTGACTCTAGTGAAAATGGATGGCTTATAAGATTCTTTGATTCTTCGTTTTTCTGTGAATGGATTGCGGTTAGTTACTTGTACAAGCATGATCATGCTGGAGTGCGTGATTATCTTTGTAATAGGATGTATACTCTTCCCTTGCAAGGGCTTGAGAGTTATTTGTTTCAGATATGTTATATGATGATACATAAGCCTAGTCCATCGTTGGATAAGTTTGTGATAGATATGTGCTCGAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTAATGGCAGAGCTGGAGGACAATGATGATAATGATGGGATTAGTAATATTCAGGAGAAGTGTCAAACTGCTGCCACCTTGATGGGTGAGTGGCCGCCTTTGATACGGCCTCAGACTGAACCTCCGAGTCCTGGAGGTAAAAGCCAAGTTTTGAATAGGTTACTTTCGTCTAAAAATCGTTTGTTGTCATTAACAACTTCTCCGCCTAAGTCTTTGTCATTTTCATCTTCACCGGGAAATAATTTGCAAGAGGATGGTACTCCGCTGTCTCCTGAGGAGAACAGGATATTTAAGAAGTTTATGCCAAGTCCAAAATTTAGAGATGCTTTGCTTTTTAGAAAGTCAGCCGACAAAGATGACGGTGATTCTGAAAAAGATGGGTTTTTCAAAAGGCTTTTAAAAGACAGCAAAGGTGATGATGAACTTGGCCAAAAAATTCGTGATGCATTTCATTTTCGGAAGTCGTCTGAGAAAGATGCCTTAGACTCTGAAAAGGACAGTTTCTTTAAAAGGTTCTTAAGAGACAGTAGGGACAGTACTAGAGGTGATGATGAAGAATCTGAAAAGGATGGTTTCTTTCAAAGGATCTTAAGGGATAGTAGAAGTGAAGACGAAGATGTGACCTCAAGTTCAGACGGATTTTTTAAGAAGTTGTTTCGAGATAATAAAAATGATTCTGAGGACAGAATAGATACAAAATCAGTGGAAGATGAAGAGAAAGATGGACTTTTCCGTAAGTTTTTCCGGGAGAAATTCGAAGATAGGAAGGATGGGCGTGATAGAAATGACAGTAAAAATCTTGCTGTTTCTGAAGAGAAATGTCCAAAACCCGATGAAGAGGATGAAAAAGATGGTTTTTTCCGGAAATTCTTCAAGGATAAATTTGAGGACAAGAAAGACACAAAAGATAAAATTGAAGAAGGAACTGCCAATGGTGAGGAAGACGAGCCTTCTGAGCTTTCCTTGTTCAAAAGGTTATTCCGTGTGCACCCTGAAGATGACAAAAGCAGTCCAGCCAATGAAAATAGCAACAATGGTGGCTTATTACAAAGTAGTCCAGGTACAGAGAATTTTTTCCGAAAATTGTTTAAAGACCGCGATCGTTCAATTGAAGATTCAGAGCTATTGGGGTCAAAGAGACAGAAAGAGAAGCATCCTGGATCCCCAATGCCGCAAAGTGAAAAATCGAGCACAAAGCCCCCATTACCGATTAATCCATCTCAGTTCCGAAGAGGGGCTTACCATGACTCATTGGAGTTTGTGCAGTCACTATGCGACACATCATATGGGTTAGTGGATGTTTTTCCAATTGAAGATCGCAAGAGTGCTCTTCAGGAGTCGCTTAGAGAGATCAATATACATGTAGCAAAGGTTCAGAACACTGGAGGAGTCTGTTTTCCACTGGGAAAAGGCATGTATCGCGTGCTTCATATGCCAGTAGATGAAGCTATTCTCTTGAATTCTAGGGAGAAGGCACCTTACATGATCTCCATTGAAGTTTTGAAATGTGAAATGCCAAGTAATTTCAAGGAGACATCTAGTTCTCAAAATCTTTCTCAAGGTGGAATTCCTTTGGCAAATGGAGATGCTTTCTTGCAAAAACCACCCCCTTGGGCTTATCCATTATGGACAGCACAAGAGGCGTACCGTAATAGTAATGATAGGATGTCCAGATCGACTGCTCAAGCAATTGACCAGGCAATGACTCATGTATCTGAGCCAAAGTTTGTAAGCCTGATTCTTTCGGTGGAAACGCAGTATAATGGTCAGGCAGGGAAAACTTATAGAGAGGATGCACATGGAGCAGCAGGAGCAGAACATGACAGTGATCTGGAATGGGTACGAGTAGTTTTGACAGCTGATCCTGGGGTTAGATTGGAAGATATTGAGGATCAAGCGCCACCTCGGAAAAAGGAACATCGCCGTGTTCCAAGTACAGTTGCAATAGAAGAAGTAAAGGCTGCAGCAGCAAAAGGGGAAGCGCCTCTTGGACTCCCTTTGAAAGGTGCTGGCCAAGACTCATCAGATGCACAACCGAGGGCCAATGGAATTACCCCCAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGATAGGGTACGCAATGCTTCCATATACGGGAAGTTACCTAGTTGGGACTTGCGATCGGTTATTGTAAAGAGTGGAGATGATTGCAGGCAGGAGCATCTGGCTGTTCAACTGATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTCTACCGCTTTGGCTGCGCCCTTATGAAGTTTTGTGTACTTCTTCTTATACAGCTCTCATTGAAACAATTCCAGATACGGCTTCTCTACACTCGATCAAAAGTAGATATCCCAACATCTCAAGTTTACGTGAATTCTTCGATGCTAAATATCAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAGAGTATGGCTGGATATTCCCTGGTGTGCTACTTTCTACAGGTGAAGGATAGGCATAATGGGAATCTCCTATTGGACGAAGAGGGTCATATCATTCATATTGATTTTGGCTTCATGCTTTCCAATTCACCTGGTGGGGTTAATTTTGAAAGTGCACCTTTTAAATTAACACGCGAGCTTCTCGAGGTCATGGATTCTGATGCCGAGGGTCTGCCAAGCGAGTTCTTTGATTATTTTAAGGTTTTATGCATTCAAGGCTTCCTCACTTGCCGCAAGCATGCCGAACGTATTATTCTTCTTGTTGAGATGTTGCAGGATTCAGGGTTCCCATGCTTTAAAGGTGGCATACGGACGATACAAAACTTACGAAAGCGATTCCATCTCAGTTTAACAGAAGAGCAATGTGTCTCCTTGGTGCTTTCTCTTATTAGCAGTAGCCTTGATGCTTGGAGAACACGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATATTGTGA 3294 0.4202 MVRLLGFARGYADEPREIESKSNLTGDSSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGLESYLFQICYMMIHKPSPSLDKFVIDMCSKSLKIALKVHWFLMAELEDNDDNDGISNIQEKCQTAATLMGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRLLSLTTSPPKSLSFSSSPGNNLQEDGTPLSPEENRIFKKFMPSPKFRDALLFRKSADKDDGDSEKDGFFKRLLKDSKGDDELGQKIRDAFHFRKSSEKDALDSEKDSFFKRFLRDSRDSTRGDDEESEKDGFFQRILRDSRSEDEDVTSSSDGFFKKLFRDNKNDSEDRIDTKSVEDEEKDGLFRKFFREKFEDRKDGRDRNDSKNLAVSEEKCPKPDEEDEKDGFFRKFFKDKFEDKKDTKDKIEEGTANGEEDEPSELSLFKRLFRVHPEDDKSSPANENSNNGGLLQSSPGTENFFRKLFKDRDRSIEDSELLGSKRQKEKHPGSPMPQSEKSSTKPPLPINPSQFRRGAYHDSLEFVQSLCDTSYGLVDVFPIEDRKSALQESLREINIHVAKVQNTGGVCFPLGKGMYRVLHMPVDEAILLNSREKAPYMISIEVLKCEMPSNFKETSSSQNLSQGGIPLANGDAFLQKPPPWAYPLWTAQEAYRNSNDRMSRSTAQAIDQAMTHVSEPKFVSLILSVETQYNGQAGKTYREDAHGAAGAEHDSDLEWVRVVLTADPGVRLEDIEDQAPPRKKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRVRNASIYGKLPSWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFDAKYQENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGLPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGIRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04463 1097 FunFam phosphatidylinositol 4-kinase beta 1 730 889 - -
Vivi5g04463 1097 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 814 1082 IPR000403 -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 486 524 - -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 486 505 - -
Vivi5g04463 1097 Pfam Phosphatidylinositol 3- and 4-kinase 836 1043 IPR000403 -
Vivi5g04463 1097 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 839 853 IPR018936 GO:0016301
Vivi5g04463 1097 Gene3D - 894 1095 IPR036940 -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 181 209 - -
Vivi5g04463 1097 SMART pi3k_hr1_6 836 1095 IPR000403 -
Vivi5g04463 1097 SUPERFAMILY Protein kinase-like (PK-like) 556 1090 IPR011009 -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 293 326 - -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 181 204 - -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 448 470 - -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 779 804 - -
Vivi5g04463 1097 CDD PI4Kc_III_beta 805 1097 - -
Vivi5g04463 1097 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 1097 IPR015433 GO:0046854|GO:0048015
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 506 520 - -
Vivi5g04463 1097 Gene3D - 692 889 - -
Vivi5g04463 1097 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 414 436 - -
Vivi5g04463 1097 FunFam Phosphatidylinositol 4-kinase beta 1 894 1095 - -
Vivi5g04463 1097 Gene3D - 43 146 IPR042236 -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 454 470 - -
Vivi5g04463 1097 MobiDBLite consensus disorder prediction 371 398 - -
Vivi5g04463 1097 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04463 Vivi-Chr5 142531070 142542921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04463 1 1096 Lipid Metabolism Gene Families AT5G09350 69.299 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04463 K19801 - gmx:100778394 1793.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04463 5 142531070 142542921 Vivi5g04463 5 142531070 142542921 ECH
Vivi5g04463 5 142531070 142542921 Vivi3g02460 3 41238540 41245971 PCT