Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02460 ATGGTGAGGTTCTTAGGATTGACTCGCGGGGTGGGTGATGAACCTCGAGAAATCGTTTCCAGGTCTAATCTGACGGGCGAGTCCAGTGAAAATGGCTGGCTTATCAGATTCTTTGACTCTCCATTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCATGCTGGTGTGCGTGATTATCTCTGTAATAGAATGTACACACTTCCCTTGCAGGGAGTCGAGGGTTATTTGTTTCAAGTGTGTTACATGATGATACACAAACCCAGTCCCTCTTTGGATAAGTTTGTCATTGATGTGTGCTCCAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTGTTGGCTGAGATTGAGGAATCTGATGAGAATGATGGGATTAGTATCATTCAGGAGAAGTGTCAAACTGCAGCTACCTTTATGGGGGAGTGGCCGCCCTTGATACGGCCTCAAAGTGCACCTTCAAGCCCTATAGACAAGAACCAAGTCTTGAGTAAAATATTGTCATCGAAACAACGATTGTTATCACTAACTTCTTCATCGCCTACACAAAGATCTTTGTCGTTCTCGCCTTCTTCAGGAAACAATTTGCAAGAGGATAGTAGTTTGGAGTCTCTTGAAGAAAACAAGCTGTTTAGGAAATTTATGCCAGGTCTGAAAGTTAGAGATGCTTTGCTTTTTAGGAAGTCAGTTGAGAAGGATGATGGTGACTCTGAAAAAGATGGTTTTTTCAAGCGGCTTTTAAGAGATAGTAAAGGTGATGATGAGTTAGGCACGAAAATTCGAGATGCTTTTCTTGTTCGCAAGTCATCTGAGAAATGTGATGAAGATTCTGAAAAGAATAATTTTCTTAAAAGGCTCTTACGGGACAGTAGAGGGGATGATGAAGACTCTGAAAAGAACAGTTTCTTTAAAAGGCTCTTGAGGGACAGTAAAGGTGGAGAGGATGAGGATCTGGCCTCAAGTTCAGAGGGATTTTTTAAGAGATTGTTTCGGGATAGCAAGAATGAATCCGAGGATAACACACACACTCGAACAATGGAAGACGAAGAAAAGGAGGGTTTTCTCCGAAAGCTTTTCCGTGATAAATTTGAAGATAAGAAGGATGGAAATGATGGAGATATTGGTAATTCTGAGGAGAAATGCGCAAAGCCTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCCGGAAATTATTTAAGGATAAATTTGAGGACAAGAAAGATATCAATGATAGAACTGAAGATGGTCGTGTGCACCCTGAGGATGGTAAAGGTGATTCAGCCAATGAAAATAATAATGGTGGCTTATTTGAAAATAGTCCAGCCGCAGAATTTTTTTTCCGCAAATTGTTTAGAGATCGTGACCGTTCAATTGAAGATTCAGAGCAATTGGGGTTAAAAAAGGATAAAGAGAACTGTCCTGGATCACCAAAGCAGCAAAATGAGAAATCAGGAACAAAGCCCCCTCTTCCAGTTAATTTATCACAGTTTCGGAAAGGAGCTTACCATGGGTCATTGGATTTTGTGTTGTCATTGTGTGAGATATCATTTGGGTTAGTTGATGTATTTCCAATTGAAGACCGCATACGTGCTCTGCATGAGTCACTTGCAGAAATCAATTTGCATTTAACAGAGGCTCATAATACTGGAGGTGTTTGTTTTCCATTGGGAAAGGGCATGTACCGAGCACTTTATATTTCTGAAGAGGAAGCTGTTCTCTTGAACTCTAGGGAGAAGGCGCCTTACCTGATCTGTGTTGAGGTCTTGAAATGTGAAATGCCCAGCATTTCCAGGGAGGCATCTAGATCTCAGAAACATTCTAAAGGTGGAATCCCCTTGGCAAATGGAGACGCTCTCTTGAAAAAGCCACCCACCTGGGCTTATCCGTTATGGACAGCACAAGAGGTATACCGTAATAGCAATGATAGAATGTCAAGATCAACAGCTCAGGCTATTGATCAGGCAATGACCCATGTATCTGAGGCAAAAATCAGATTTGTTAGTGTGAATCTTTCTGTAGAAAGACAATCACATGGTCAGCTTGAGAAGACTAATGTGGATCCACATGGTGTCGGTTGGTGTTCTGCTGCAGTTTATAGAGATGGTATACAAGAAATGGAAAGACCAGAACATGACAATAATATGGAGTGGGTAAGGGTAGTGTTGAAAGCTGATCCTGGGGTTAGAATGGAAGATATTGAGAATCCAACTCCACGACGAAGAAAGGAGCATCGCCGTATTCCAAGCACAGTAGCACTAGAGGAAGTAAAGGCCGCGGCAGCAAAAGGGGAAGCACCTCTTGGTCTCCCATTGAAAGGGGCTGGTCAAGATTCATCAGATGCACAACCAAGAGCAAACGGAATTACTCCTAAAGCCAGCGATGCCTTGTCTGGTGAACTTTGGGATGTAAAGAAAGAGAGGATAAAGAAGGCTTCTATTCATGGAAACTTACCTGGTTGGGACTTGAGATCTGTTTATCCTGTCATGCTTAACATGGTGTGCTAA 2514 0.4212 MVRFLGLTRGVGDEPREIVSRSNLTGESSENGWLIRFFDSPFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGVEGYLFQVCYMMIHKPSPSLDKFVIDVCSKSLKIALKVHWFLLAEIEESDENDGISIIQEKCQTAATFMGEWPPLIRPQSAPSSPIDKNQVLSKILSSKQRLLSLTSSSPTQRSLSFSPSSGNNLQEDSSLESLEENKLFRKFMPGLKVRDALLFRKSVEKDDGDSEKDGFFKRLLRDSKGDDELGTKIRDAFLVRKSSEKCDEDSEKNNFLKRLLRDSRGDDEDSEKNSFFKRLLRDSKGGEDEDLASSSEGFFKRLFRDSKNESEDNTHTRTMEDEEKEGFLRKLFRDKFEDKKDGNDGDIGNSEEKCAKPAEEDEKEGFFRKLFKDKFEDKKDINDRTEDGRVHPEDGKGDSANENNNGGLFENSPAAEFFFRKLFRDRDRSIEDSEQLGLKKDKENCPGSPKQQNEKSGTKPPLPVNLSQFRKGAYHGSLDFVLSLCEISFGLVDVFPIEDRIRALHESLAEINLHLTEAHNTGGVCFPLGKGMYRALYISEEEAVLLNSREKAPYLICVEVLKCEMPSISREASRSQKHSKGGIPLANGDALLKKPPTWAYPLWTAQEVYRNSNDRMSRSTAQAIDQAMTHVSEAKIRFVSVNLSVERQSHGQLEKTNVDPHGVGWCSAAVYRDGIQEMERPEHDNNMEWVRVVLKADPGVRMEDIENPTPRRRKEHRRIPSTVALEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWDVKKERIKKASIHGNLPGWDLRSVYPVMLNMVC 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02460 837 MobiDBLite consensus disorder prediction 180 205 - -
Vivi3g02460 837 MobiDBLite consensus disorder prediction 371 391 - -
Vivi3g02460 837 MobiDBLite consensus disorder prediction 480 494 - -
Vivi3g02460 837 MobiDBLite consensus disorder prediction 413 429 - -
Vivi3g02460 837 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Vivi3g02460 837 SUPERFAMILY ARM repeat 54 125 IPR016024 -
Vivi3g02460 837 PANTHER PHOSPHATIDYLINOSITOL KINASE 41 825 IPR015433 GO:0046854|GO:0048015
Vivi3g02460 837 MobiDBLite consensus disorder prediction 770 796 - -
Vivi3g02460 837 MobiDBLite consensus disorder prediction 464 479 - -
Vivi3g02460 837 MobiDBLite consensus disorder prediction 464 495 - -
Vivi3g02460 837 MobiDBLite consensus disorder prediction 413 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02460 Vivi-Chr3 41238540 41245971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02460 1 827 Lipid Metabolism Gene Families AT5G64070 60.800 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02460 K19801 - gmx:100781715 1276.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02460 3 41238540 41245971 Vivi3g02460 3 41238540 41245971 ECH
Vivi5g04463 5 142531070 142542921 Vivi3g02460 3 41238540 41245971 PCT