Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04362 ATGGCTTCTACAGCCAAGGGTGAGAGGAAGATTGCAGTTGATCTTGCTTCATGGATGTTCAATGTAGTCACATCTGTAGGAATCATTCTTGTCAACAAAGCACTCATGGCTACATATGGTTTCACTTTTGCTACAACGCTAACTGGTCTGCATTTTGCCACAACAACCTTGTTAACAACTTTTCTTAAGTGGAACGGATACATCCAGGACACTCATCTTCCTTTGCCCGAAGTTATCAAATATGTTTTGTTTGCAAATTTCTCTATTGTGGGAATGAATGTTAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATTGCGAAGCTGAGTATGATTCCGGTATCTTGTTTTCTTGAAATTGTCTTGGACAATGTGAGATATTCAAGAGATACAAAGCTTAGCATTTCTCTTGTTCTCCTAGGAGTTGCTGTTTGTACTGTTACTGATGTGAGTGTCAATGCTAAGGGTTTCATCTCTGCTGTAGTGGCAGTTTGGAGCACTGCACTGCAACAATATTATGTGCATTTTCTTCAGAAGAAGTATTCTCTTGGATCTTTCAACTTGTTAGGCCATACAGCCCCAATACAGGCATCAAGTTTACTTCTAGTCGGCCCCTTTCTCGACTATTGGTTAACAAACAAACGAGTTGACGCATATAACTACGGTTTAACATCCATCTTGTTCATTGCTCTGTCGTGCACAATCGCGGTCGGAACAAACCTTAGTCAGTTCATATGCATTGGAAGGTTCACAGCAGTATCATTTCAAGTCCTTGGCCACATGAAGACTATTCTTGTCCTTACATTAGGATTCATTCTATTTGGAAAAGAGGGTCTCAATCTACAAGTAATAGTAGGCATGATCATTGCTATACTAGGAATGATTTGGTATGGAAATGCATCTTCGAAGCCGGGAGGAAAAGAGTCTCAGAGTAACTTGTCCATTCCTATTCCTACCACCAAAACACAAGATTATAAATTACTACCAGTAGAATCTGCTGAAACTAATGATGAGGAAGTGTAG 1023 0.3978 MASTAKGERKIAVDLASWMFNVVTSVGIILVNKALMATYGFTFATTLTGLHFATTTLLTTFLKWNGYIQDTHLPLPEVIKYVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEIVLDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFISAVVAVWSTALQQYYVHFLQKKYSLGSFNLLGHTAPIQASSLLLVGPFLDYWLTNKRVDAYNYGLTSILFIALSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLTLGFILFGKEGLNLQVIVGMIIAILGMIWYGNASSKPGGKESQSNLSIPIPTTKTQDYKLLPVESAETNDEEV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04362 340 PANTHER SOLUTE CARRIER FAMILY 35 15 301 - -
Vivi5g04362 340 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04362 Vivi-Chr5 141167228 141169757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04362 24 303 Organic Solute Cotransporters AT3G10290 24.915 5.09e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04362 K26224 - gmx:100814890 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04362 5 141167228 141169757 Vivi5g04362 5 141167228 141169757 ECH
Vivi5g04362 5 141167228 141169757 Vivi3g02579 3 43556596 43558683 ECH
Vivi5g04362 5 141167228 141169757 Vivi3g02525 3 42447292 42453954 PCT