Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02525 ATGTCATCTGCAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCATGGTTGTTTAACGTGGTCACATCTGTGGCAATAATCCTTGTGAATAAAGCCCTAATGGCCACTTATGGGTTTAGTTTTGCCACAACTTTAACTGGCTTGCATTTTGCCACTACAACCTTGTTGACGATCATTCTTAAATCGCTGGGATATATCCAGACCTCTCATCTTCCAAAATCTGATATCATCAAGTTTGTCTTATTTGCAAATTGCTCCATTGTTGGCATGAATGTGAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGACTATGATTCCAGTATCGTGTCTACTGGAAGTTGTCTTGGACAATGTGCGATATTCAAGGGACACAAAGCTTAGTATTATCTTGGTTTTGGCTGGTGTTGCGGTCTGTACTGTCACCGATGTCAGCGTCAATACGAAGGGTTTCATAGCTGCCGTCATTGCAGTTTGTAGCACAGCACTGCAGCAGTATTATGTGCATTTTCTTCAGAGGAAATATTCTATTGGGTCATTTAACTTGTTGGGACACACTGCACCAGCACAGGCAGCAAGTTTACTGCTAGTAGGCCCCTTTATGGACTATTGGTTAACAAACAAACGAGTTGATGCATATGATTATGGCTTGACATCCACTCTGTTCATTATTCTGTCTTGCACTATCGCGGTAGGGACAAATCTCAGCCAGTTCATCTGCATTGGTAGGTTTACGGCTGTATCATTCCAAGTCCTTGGTCATATGAAGACTATTCTGGTCCTATTCATGGGATTCATTTTCTTTGGAAAAGAGGGTCTCAATCTACATGTTGTTCTAGGCATGGCAATTGCAATAGCAGGAATGGTTTGGTATGGAAATGCTTCTTCTAAGCCAGGAGGGAAAGAGCGTCGTAGCTTTTCCCTTCCTACCACCAAAACACAAGATTATGCTGCACTACCCGTGTACTCTGAATCTGTTGAGAAGGCATAA 1008 0.4256 MSSASKGDRKASLDAASWLFNVVTSVAIILVNKALMATYGFSFATTLTGLHFATTTLLTIILKSLGYIQTSHLPKSDIIKFVLFANCSIVGMNVSLMWNSVGFYQIAKLTMIPVSCLLEVVLDNVRYSRDTKLSIILVLAGVAVCTVTDVSVNTKGFIAAVIAVCSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFMDYWLTNKRVDAYDYGLTSTLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLFMGFIFFGKEGLNLHVVLGMAIAIAGMVWYGNASSKPGGKERRSFSLPTTKTQDYAALPVYSESVEKA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02525 335 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Vivi3g02525 335 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02525 Vivi-Chr3 42447292 42453954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02525 18 333 Organic Solute Cotransporters AT1G21870 22.324 2.25e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02525 K26224 - gmx:100794276 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04362 5 141167228 141169757 Vivi3g02525 3 42447292 42453954 PCT