Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03858 ATGAAGAACAATTCAAATACCAAGCTTATCCTCCTCCACCCTTCTCTCCATAAACAACCCCCAACACCATCCTTCCTCTCTCACCGCCTCTGCCTCTCCTTCTTCCTCATCACTTTCCTCACCACCCTCTTCATCCTCTCTCTCATCACAACCATCTCCACCTCCGCCGCCAACTCCGCCGCATCCTCTTCTTCCTCCCCTCTCCCACTCTCCGTAACCAAAGCCCTTCTCCACTACGCCTCCCTCTCAAACTCCACCACCAAATCCATGTCCTTCACAGAAATCAACACCATAGCAACATCTCTCCATCTCACACCAAACCCAAACTTCCTCATCTTCGGTCTCACCCACGAGTCACTCCTCTGGTCTGCACTCAACCACAACGGCCGCACTGTTTTCGTCGACGAAAACGAATACATGATCTCGAAATTCGAACAGTCCAACCCCGGAATCGAAGCTTACGATGTTCAGTTCACAACTAAAGTCAGTGACTATCCCAACCTTCTTTCTCAGGCGAAAGAACAGTCCAAACAAGAGTGCAAACCTGTGCAGAATCTCTTGTTCTCTGAGTGTAAACTCGGAATCAACGACTTACCGAACCATATATACCAAATCTCTTGGGATGTGATTCTTGTAGATGGGCCAAGAGGGTATTTTCCGGCAGCCCCGGGGAGAATGTCGGCGATTTTCACGGCGGGGGTGTTGGCTCGGAGTAATAAGAAAGTGGGAAAAACTCATGTTTTCGTCCATGATATTGGGAGAGAGGTGGAGAAGATTTTCAGCAATGAGTTTCTTTGTGAAGAGAATTTGGTTAACAATGTGGATCAGTTGGGGCACTTTGTAGTGAAGAGTGAAAGCGACAATGGTGGAAGTTCTGAGTTTTGCAGAAATTCCAGTTCTCCGTTGTCTGTGTCGGCGTCAAAGGATGTTGACTGA 936 0.4818 MKNNSNTKLILLHPSLHKQPPTPSFLSHRLCLSFFLITFLTTLFILSLITTISTSAANSAASSSSSPLPLSVTKALLHYASLSNSTTKSMSFTEINTIATSLHLTPNPNFLIFGLTHESLLWSALNHNGRTVFVDENEYMISKFEQSNPGIEAYDVQFTTKVSDYPNLLSQAKEQSKQECKPVQNLLFSECKLGINDLPNHIYQISWDVILVDGPRGYFPAAPGRMSAIFTAGVLARSNKKVGKTHVFVHDIGREVEKIFSNEFLCEENLVNNVDQLGHFVVKSESDNGGSSEFCRNSSSPLSVSASKDVD 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03858 311 PANTHER OS11G0490100 PROTEIN 4 296 IPR006514 GO:0045492
Vivi5g03858 311 MobiDBLite consensus disorder prediction 286 311 - -
Vivi5g03858 311 Pfam Polysaccharide biosynthesis 94 280 - -
Vivi5g03858 311 NCBIfam TIGR01627 domain 67 295 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03858 Vivi-Chr5 133449484 133450678 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03858 - - vun:114176135 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03858 5 133449484 133450678 Vivi1g02831 1 61361177 61362267 ECH
Vivi5g03858 5 133449484 133450678 Vivi5g03858 5 133449484 133450678 ECH
Vivi5g03858 5 133449484 133450678 Vivi1g02831 1 61361177 61362267 PCT