Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02831 ATGAAGAACACAAACACCAACACAAAACTCATTCTTCTTCATCCTTATATCCAGAAACAAGGAAACTCGAATCGGTTATGGCTTCTTGCATTCATCTCAATTCTCACTTTAGCTTTCCTTGCAACACTCATTTACACAAGAGACAGAGAATCAACCTTAAACAACGCAAACACTTCCATAATTTCATCTGTTATTACTACTACCAACGCTGTTTCTGCACCATTACCAGCAACAGTTATCAACACTCTTATTCACTATGCTTCGAAATCAAACGACACGTACCACATGACATACTCAGATCTCAAACCGATCTCCGACGTGCTTCGAAAATGTTCGTCTCCGTGTAACTTGCTCGTTTTCGGTCTCACACCGGAGACACTTCTATGGAAAGCACTTAACCACAATGGAAAAACAGTGTTCATCGATGAAAATCGATACTACGCAGCTTATATAGAAGAAAAACACCCTGAGATTGATGCTTATGATGTTCAATACACAACGAAAAGAAGCGAGATGAAAGAGTTGATAGCTTCAGCTAAAGAGCATGTAGCAAATGAATGTAAGCCAGTGCAGAATCTATTATTCTCGGATTGTAAACTCGGAATCAATGATCTTCCTAACCATGTTTATGAGGTTGATTGGGATGTTATATTGGTTGACGGACCGCGCGGGGATTGGCCGGAAGCTCCCGGGAGAATGTCCGCGATATTTACCGCCGGGGTGTTGGCTAGAAGTAAGAAAGGTGGGAACCCTAAAACTCATATTTTCTTGCATGATTTTTCTGGTGAAGTGGAACAGGTTTGTGGTAATGAGTTTTTGTGTAAAGAGAATTTGTTGGAAGCAAGTGGAACTATGGGGCATTATGTTTTGGAAAGGATGAATGAGAGCAGTGTTCAATATTGTAAAGAGTCTTCTTCATCTTTATCCACTTAG 933 0.4041 MKNTNTNTKLILLHPYIQKQGNSNRLWLLAFISILTLAFLATLIYTRDRESTLNNANTSIISSVITTTNAVSAPLPATVINTLIHYASKSNDTYHMTYSDLKPISDVLRKCSSPCNLLVFGLTPETLLWKALNHNGKTVFIDENRYYAAYIEEKHPEIDAYDVQYTTKRSEMKELIASAKEHVANECKPVQNLLFSDCKLGINDLPNHVYEVDWDVILVDGPRGDWPEAPGRMSAIFTAGVLARSKKGGNPKTHIFLHDFSGEVEQVCGNEFLCKENLLEASGTMGHYVLERMNESSVQYCKESSSSLST 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02831 310 PANTHER OS11G0490100 PROTEIN 5 302 IPR006514 GO:0045492
Vivi1g02831 310 Pfam Polysaccharide biosynthesis 101 287 - -
Vivi1g02831 310 NCBIfam TIGR01627 domain 75 301 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02831 Vivi-Chr1 61361177 61362267 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02831 - - gmx:100790865 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03858 5 133449484 133450678 Vivi1g02831 1 61361177 61362267 ECH
Vivi1g02831 1 61361177 61362267 Vivi1g02831 1 61361177 61362267 ECH
Vivi5g03858 5 133449484 133450678 Vivi1g02831 1 61361177 61362267 PCT