Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03383 ATGGCTTCGGGGCCTACGGATGGAGCTAAAGAGAGGCAGAGATACATCGAAGGTAAGGTTTACAGAAGGAGAGTTTTCAGAGGTACCAAGAGAAACCCCAACGTAGGGGATACTGTAGCTTCTGCCACCACAAATGCTAAAGATAATAAAGTTCCCACTACTACAGTCACCAATGACATCGATAATAACAAGAACATTAATAACGATGAAGCCAAGATTAATGTTTTGGCTCAGCCAGTGGTTCCTCAATTGGCAGTATCGGAGGATGGGGATTTAGCTCAGGCTGAAGGGAGTTCAAGATTGGAGGATGGAAATACAGGTCAGCCACAGGGGAGTTCAAGATTAGAGGATGGAAATTCACCACAACAGCAATTGGAGGACCAGAATTTGGTTGGGGAACAAGTGAGTTCAAGAACAGGGGATGGGAATTCACCTCAGCGGCAATTAAAGGAGCAGAATTTGGCTCAGCCACAAGCAAGTTTGAGAACAGGGGATGGGAATTCACCCCAGCAGCTATTCAAGGACCAGAATTTGGTTGGGCAACAAGTGGGTTCAAGAACAGAGGATGGGAATTCACCTCAGCAGTTAAAGGAGCAGAATTTGGCTCAGCCTCAAGCAGATTTGAGAGCGGATGATGGGAATTCACCCCAACAGAATTTGGAGGACCAGAATTTGGTTGGGCAACACGTGAGTTCAAGAACAGAGGATGGGAATTCACCTCAGCAGCAATTAAAGGAGCAGGATTCGGCTCAGCCACAAGCAAGTTTGAGAACAGGGGATGGGAATTCACCCCAGCAGCTATTCGAGGGCCAGAGTTTGGGTCAGCCACAAACGAGTTCGAGAACAGGGGATGGGAATTCACCCCAGCAGCTATTTGAGGACCAGAGTTTGGGTCAGCCACAAACGAGTTCGAGAACAGGGGATGAGAATTCACCCCAGCTGCAATTTGAGGACCAGAATTTGGCTCAGGCACATGTGAGTTCAAGAGCAGGGGATAAGAATTCACCCCGGCCTCAAAGCTCAACCCATAAGGATGTGAATTCTCAGCCTCAGGAAAATTCAAGACCAGATGATGGGAACATTTCTCAGCTAGAAGTGAGTTCAAGATTGGAAGACGGGAGTTTGCCTCACCCGGAATTAATTTCCAAGTTGGATGACAGGGCTTCTCTGCAGCAAGATAATTCAATGTTGGAAGATGAGGATTTGTCTCAGCCACAAGTGAATTTGGGATTGGATGAAGGGAATTCACTTCAACCACTAGTCAATTCCACATTAGAGGATCAGAATCTGGCTCAGCCGCCCTCGCCACCAGTTTCTGACCACTTGCACAGCCATCAGCAGCCCGAGCCTTCTAACGTCAATATACGGCGGGAGGATGATAGATCTTCAAGCCCCATCCATAACCACGGGGCAATTTCCGATGACTTGCATAACCATCAGCAGGCTGAACCTTCTAACCCTGATGTTCAGCAGGAGGATGATGGACCTTCGAGCCTCATTTATGGGCATGGGGCAGTTCCTAGCACTGGGTATCGACATTCCGAGAATATGACCGTGGAGCCGAGTCAAGAGGACCGATTCAAGATCAATCTGGCCTTGAAGTCAAAGCAGGAGAAACAAGAGATACGCTGGAAGCTTGAAAATGAGCTCGGTGTAGTGAGAAATTTGGTCAAGAAGATTGAAGTGAAACAGGGGCATGTTGGTGCTTATGGCAATTCAAATGTAGGTGTTTATGGAAATTCAAATGTAGGTGCTTATGGAAATTCAAATGTAGGTGCTTATAGCAATTCAAATGTAGGTGCTTATGGCAATTCAAATGTAGTGTTGGGTGGTGGGATCTCTAATGGAGGTGGAGCAAAGCGTGCTCACTCAGAGGTAGCATCTGCTGGTGTTTCGCGACAACCTACCAGGCCTTTGCACCAGTTAAGTTTTCCGATGTTCCATAATAGTCAAGGGGTCGGTGAAAATGTTGAGAAGGAAAAGAGAATGCCTAAAGCAAACCAGTTTTATCATAACTCAGAGTTCCTGCTTGCAAAAGATAAATTCCCACCTGCAGAGAGCAACAAGAAGTCAAAATTGAATTGGAAGAAGCAAGGTGGTGGAGAAATGGGTCCCGGGCTTCGAATGGGATCCAAGTTTTTCAAGAGCTGTAGTTCACTGCTTGAAAAATTGATGAAACACAAGCATGGGTGGGTGTTTAATTCTCCTGTTGATGTCGAGGGTCTTGGTTTGCATGACTATTTTACGATCATCACTCATCCAATGGACTTAGGAACTGTGAAGACAAGGCTGAACAAGAATTGGTACAAATCACCGAAGGAATTTGCAGAGGATGTGAGACTCACTTTTGATAATGCTATGACATATAATCCAGAGGGACAGGATGTTCATGTGATGGCAGAGCAATTATCAAAGGTTTTCGAGGACAGATGGGCTATAATAGAGTCAGATTACAATCGTGAGATGAGATTTGGCATGGAGTATGGTGCACCTTCACCTTTGCCTAGAAGGGCTCCTACGTTTACTCCACCGCCTCTAGATATGCGACGAATTTTGGACAGATCCGAATCTTTGGCACGAACTCCAAGATCTATGAACAATACTCCATCAAGTAGAACCCCAGCCCCAAAAAAGCCAAAGGCAAAAGATCCGAATAAAAGAGACATGACATTTGATGAAAAGCAAAAACTAAGCACAAACCTTCAGGGTTTACCTCCAGAGAAGCTTGATGCTATTGTACACATCATTAAGAGGAGAAATTTAGCCTTGAATCAACATGATGATGAAATTGAAGTGGACATTGACAGCGTGGATGCTGAGACTCTTTGGGAGCTTGATAGATTTGTGACCAACTATAAGAAAAGTTTGAGCAAGAACAAGAGGAGGGCTGAAGTTGCTCGAGCGAGAGCAGAAGCTTTGCAGAATTCCATCCAGAGGAGCCAGCCACCAGCTATGATAGAGATTTCTAGAGAACCACAAGCAGATGAAAGAAATGTTCCCCCATCCTTGCCTATGCAAGGGGGAAGTCAAGCAGATAATAGAAGTAGATCAAGTAGTTCAAGCAGCTCTAGTAGTGATTCTGGGTCTTCTTCAAGTGATTCTGATAGTGACAGTTCCTCAGCCTCGGGATCTGATGCAGGGTCACAAGGAACCTGA 3156 0.4563 MASGPTDGAKERQRYIEGKVYRRRVFRGTKRNPNVGDTVASATTNAKDNKVPTTTVTNDIDNNKNINNDEAKINVLAQPVVPQLAVSEDGDLAQAEGSSRLEDGNTGQPQGSSRLEDGNSPQQQLEDQNLVGEQVSSRTGDGNSPQRQLKEQNLAQPQASLRTGDGNSPQQLFKDQNLVGQQVGSRTEDGNSPQQLKEQNLAQPQADLRADDGNSPQQNLEDQNLVGQHVSSRTEDGNSPQQQLKEQDSAQPQASLRTGDGNSPQQLFEGQSLGQPQTSSRTGDGNSPQQLFEDQSLGQPQTSSRTGDENSPQLQFEDQNLAQAHVSSRAGDKNSPRPQSSTHKDVNSQPQENSRPDDGNISQLEVSSRLEDGSLPHPELISKLDDRASLQQDNSMLEDEDLSQPQVNLGLDEGNSLQPLVNSTLEDQNLAQPPSPPVSDHLHSHQQPEPSNVNIRREDDRSSSPIHNHGAISDDLHNHQQAEPSNPDVQQEDDGPSSLIYGHGAVPSTGYRHSENMTVEPSQEDRFKINLALKSKQEKQEIRWKLENELGVVRNLVKKIEVKQGHVGAYGNSNVGVYGNSNVGAYGNSNVGAYSNSNVGAYGNSNVVLGGGISNGGGAKRAHSEVASAGVSRQPTRPLHQLSFPMFHNSQGVGENVEKEKRMPKANQFYHNSEFLLAKDKFPPAESNKKSKLNWKKQGGGEMGPGLRMGSKFFKSCSSLLEKLMKHKHGWVFNSPVDVEGLGLHDYFTIITHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFDNAMTYNPEGQDVHVMAEQLSKVFEDRWAIIESDYNREMRFGMEYGAPSPLPRRAPTFTPPPLDMRRILDRSESLARTPRSMNNTPSSRTPAPKKPKAKDPNKRDMTFDEKQKLSTNLQGLPPEKLDAIVHIIKRRNLALNQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRRAEVARARAEALQNSIQRSQPPAMIEISREPQADERNVPPSLPMQGGSQADNRSRSSSSSSSSSDSGSSSSDSDSDSSSASGSDAGSQGT 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03383 1051 ProSiteProfiles Bromodomain profile. 725 797 IPR001487 GO:0005515
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 210 369 - -
Vivi5g03383 1051 ProSiteProfiles NET domain profile. 879 960 IPR027353 -
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 28 66 - -
Vivi5g03383 1051 Gene3D - 695 824 IPR036427 GO:0005515
Vivi5g03383 1051 Pfam Bromodomain 717 801 IPR001487 GO:0005515
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 99 202 - -
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 478 493 - -
Vivi5g03383 1051 SMART bromo_6 707 816 IPR001487 GO:0005515
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 973 1051 - -
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 859 874 - -
Vivi5g03383 1051 PANTHER OSJNBA0053K19.4 PROTEIN 515 1044 - -
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 828 889 - -
Vivi5g03383 1051 SUPERFAMILY Bromodomain 708 819 IPR036427 GO:0005515
Vivi5g03383 1051 CDD Bromo_plant1 714 811 IPR037377 -
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 387 451 - -
Vivi5g03383 1051 Gene3D - 882 962 IPR038336 -
Vivi5g03383 1051 Coils Coil 953 976 - -
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 86 513 - -
Vivi5g03383 1051 Pfam Bromodomain extra-terminal - transcription regulation 889 950 IPR027353 -
Vivi5g03383 1051 PRINTS Bromodomain signature 778 797 IPR001487 GO:0005515
Vivi5g03383 1051 PRINTS Bromodomain signature 728 741 IPR001487 GO:0005515
Vivi5g03383 1051 PRINTS Bromodomain signature 760 778 IPR001487 GO:0005515
Vivi5g03383 1051 PRINTS Bromodomain signature 744 760 IPR001487 GO:0005515
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 1003 1051 - -
Vivi5g03383 1051 MobiDBLite consensus disorder prediction 34 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03383 Vivi-Chr5 125234823 125240651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03383 - K11684 gmx:100780669 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03383 5 125234823 125240651 Vivi5g03383 5 125234823 125240651 ECH
Vivi2g07039 2 212385890 212391693 Vivi5g03383 5 125234823 125240651 PCT