Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03357 ATGCAACAAGCAATTCCTTATAGGTCATATACCACTTCCACCACTCACTTCAATGTTATCAAACCAAACACATTAACAACAAATAAAATCCAAAATTCTATCAATGATTCATCTCATGTCTTCTTCTTTGATATTAAGGAAAACCAGAAAACAATAATTCGTAACATGGTATCAGAGAACGCGGTTATAGTCTTCGCTAGGCGGGGATGTTGTATGAGCCATGTCGTGAAGCGGTTGCTTCTCGGCCTTGGTGTTAATCCGGCTGTTCATGAAGTTGAAGAAAAAGATGAAGTTGATGTTGTTAAAGAATTGGAATCAATTGCAAATGATGATGGGAAGGTTCAATTTCCAGTAGTGTTTATAGGTGGAAAATTGTTTGGAGGATTGGATCGAATTATGGCTACTCATATTTCTGGTGAATTGGTTCCTATTCTCAAACAAGCTGGGGCTTTATGGCTCTAG 462 0.3788 MQQAIPYRSYTTSTTHFNVIKPNTLTTNKIQNSINDSSHVFFFDIKENQKTIIRNMVSENAVIVFARRGCCMSHVVKRLLLGLGVNPAVHEVEEKDEVDVVKELESIANDDGKVQFPVVFIGGKLFGGLDRIMATHISGELVPILKQAGALWL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03357 153 ProSiteProfiles Glutaredoxin domain profile. 50 152 - -
Vivi5g03357 153 SUPERFAMILY Thioredoxin-like 52 152 IPR036249 -
Vivi5g03357 153 NCBIfam glutaredoxin-like family 53 153 IPR011905 -
Vivi5g03357 153 Pfam Glutaredoxin 62 125 IPR002109 -
Vivi5g03357 153 CDD GRX_GRXh_1_2_like 61 144 - -
Vivi5g03357 153 PANTHER GLUTAREDOXIN 53 153 IPR011905 -
Vivi5g03357 153 Gene3D Glutaredoxin 43 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03357 Vivi-Chr5 124737247 124738000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03357 53 153 Miscellaneous Gene Families AT4G15690 45.098 4.27e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03357 - - psat:127106663 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03357 5 124737247 124738000 Vivi5g03357 5 124737247 124738000 ECH
Vivi2g07016 2 212043384 212044037 Vivi5g03357 5 124737247 124738000 PCT