Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07016 ATGCATCAAGCAATTCCTTACATGTCACTTCACAATAACTACAACTTTGGTAATATTAATGAAAAATATTGTTATAACAAGAAGAAGGAGGAGAAGGTGAATCGTCTTTCTATGCTGAAAATGGTTTCTGAGAAAGCTGTGATAGTCATTGGAAGACACGGTTGCTGCATGACTCATGTGGTGAAACGTCTTCTACAGAGTCTAGGTGTTAACCCTGGGATTCATGAGGTGGAGGAAGAGAAAGATGAAGTGCGTGTTGCTAAAGAATTGGAATCCATGATTGAAGGGAAAGATAATGTGCAGTTTCCGATGGTGTTTATAGGTGGTAAGTTGTTTGGTGGATTGGATCGTGTTATGGCTACTCATATTTCTGGTGAATTGGTCCCGTTGCTTAAACAAGCTGGAGCTTTGTGGCTATGA 420 0.4 MHQAIPYMSLHNNYNFGNINEKYCYNKKKEEKVNRLSMLKMVSEKAVIVIGRHGCCMTHVVKRLLQSLGVNPGIHEVEEEKDEVRVAKELESMIEGKDNVQFPMVFIGGKLFGGLDRVMATHISGELVPLLKQAGALWL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07016 139 Pfam Glutaredoxin 47 111 IPR002109 -
Vivi2g07016 139 Gene3D Glutaredoxin 27 138 - -
Vivi2g07016 139 SUPERFAMILY Thioredoxin-like 40 138 IPR036249 -
Vivi2g07016 139 ProSiteProfiles Glutaredoxin domain profile. 35 138 - -
Vivi2g07016 139 NCBIfam glutaredoxin-like family 40 139 IPR011905 -
Vivi2g07016 139 PANTHER GLUTAREDOXIN 39 139 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07016 Vivi-Chr2 212043384 212044037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07016 40 139 Miscellaneous Gene Families AT4G15690 44.554 2.66e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07016 - - mtr:25487713 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07016 2 212043384 212044037 Vivi2g07016 2 212043384 212044037 ECH
Vivi2g07016 2 212043384 212044037 Vivi5g03357 5 124737247 124738000 PCT