Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02019 ATGGAGGAAACCTTTAGCCCTACTAGACAGAGACTTCCCGTTGCGGCACGAATTCAATCCCCCACCAGTCCCTTCATACTCGGTTCCAATGACGATCAGCTGGAACGCGCCCAAGCACGTGCAGCACGCGCCGCCGTTATCCGCCGCAAGACTCAAACTGTCTCCCAATCCACCGATGCCGATTCTGATCCCTGTCTCAACAAACAGCAGATCTTCGATTTGTTCCAGAACTGCATAAAGCTTGCCAGCGAAAATAAAATTAATCAGAAAAATACTTGGGAGTTGAACTTGATTGATCACCTTACTGATATTGTTAAGCCGGAAGAAGAAAATGATACGGAGACCAACTTTCAGAAGGCAAGCTGCACTCTTGAGGCTGGTGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCATACAAAGTCCTTGGTGGGATGAATAGAGCGGGACAAGACGCTGAGCCAGACACTAGTCTGGAGAGTATTAATGTTGAAAGTGGACAAAAAGGAAGCAGGAAAGAGACAGATAGAAAGTTGTCACCTTTGTCAACACTGGAATCATCTTTTGAGGCTCTTAATGTCAAGAAGTTTGATGCTGCATTTGTTGTGGATCCCCTCTATCGCCAAACAACGGCAAAATTTGACGAAGGAGGAGCCAAAGGCCTTTTAATGAATAATCTCGGAGTATATGGTGGTTGTAGGATGCTCTTTGATTCACAAGAAGTACCTGCAAAATGTATGAAAAGGCAAAATGAACCTGATACCTCGAATAGCATTGATATTTCTTTTGCCAAAGATTGTGTTGAGCAGATGTTATTGGAGATGCATGTAAAGAAAGAAATTTCTCCAACTCTCCGGACTATAGTAAACCAATTCGATGAGACTAATAGAAGGCCTACTGATTTTCAACTTCATGGCCAGAATTCAGCTGAAGAGCTTGATGCTGATTTTAATTGTGAAAATGGGGCTGACGGAGCAGACTATGAGAACTGCACGACCTGGAGTGATGATCATGATGACCAACCAGTTGTTGCTGATCTAGGCTCTAATGATGTTGATCCAAGTTTCTCTAGTTACCCTCAGGAAAATGAGCAATTTCCTTCCACAGAGTCTGATATGGATGACAGATTTGAAAATGTTGATGGTTTCTTATTCTTGAGTCTGGGTTTTAATTCAAAACAGAATGCTTGGGCAGGCCCTGATCATTGGAAGTATAAAAAATCTAAAGTTTCTGAGGTTCAACCTACTTCCGAAGATGGGTCAACCCTGAAAACTAGGCAGACAAAGAGTAAGAAACAAACTGAAGTTGATTTAGATTTCACAAATTCTCTGGAGAAAAACTTTATGGATATATTTGCTCCTCCCAAGAATCCAAAAACATTACTTCTCCCTGAGAGTAGGCCGCCTTGCAATACAAAACTTCCAGAGGACTGCCACTATCAGCCAGAGGAACTTGTCAAGCTATTTCTTCTTCCGGATGTGAAGTGTCTTGGGAGGAGGGCAAAAAGAGTCCCAGATGCAGATGGATCTAGTGATCAGTTCAACGAGAATGATTTATTCCCTTCATGGGATAATGGAAGTGCTTGTGGAGGTGATGAGGGTGGTGAATATGAAGGTGTTCATCACAATGATATTGAGGACCTTGACACTCTTATTACTCAGCCTCGTCAGGTCAGTAAAGTCGAAGTACAGTATGACAAAACGTCCAAACAAGTTGATGTTCAAGCGCTAAAAGTTACTCTTTGGGACCAAGTTCAGGCATCTGCTAAACTTCCTCCTGTTCAGGATCAAGAAGAAATAATATATTTCAAGAATGTGTTGGCTAATTTTCCTGCCAAATGCAATGCTGCCGCAAACATCAGTGACATATCTCCTCATTTGTGCTTTATATGTCTACTGCATTTGGCAAATGAGAATGGATTGAGACTTCAAGGCTTTCCCAACTTGGATAATCTTTCAATATTCCTTCCACCTGATGCTGAGCCTGCACTCTAA 2004 0.4222 MEETFSPTRQRLPVAARIQSPTSPFILGSNDDQLERAQARAARAAVIRRKTQTVSQSTDADSDPCLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIVKPEEENDTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEPDTSLESINVESGQKGSRKETDRKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRMLFDSQEVPAKCMKRQNEPDTSNSIDISFAKDCVEQMLLEMHVKKEISPTLRTIVNQFDETNRRPTDFQLHGQNSAEELDADFNCENGADGADYENCTTWSDDHDDQPVVADLGSNDVDPSFSSYPQENEQFPSTESDMDDRFENVDGFLFLSLGFNSKQNAWAGPDHWKYKKSKVSEVQPTSEDGSTLKTRQTKSKKQTEVDLDFTNSLEKNFMDIFAPPKNPKTLLLPESRPPCNTKLPEDCHYQPEELVKLFLLPDVKCLGRRAKRVPDADGSSDQFNENDLFPSWDNGSACGGDEGGEYEGVHHNDIEDLDTLITQPRQVSKVEVQYDKTSKQVDVQALKVTLWDQVQASAKLPPVQDQEEIIYFKNVLANFPAKCNAAANISDISPHLCFICLLHLANENGLRLQGFPNLDNLSIFLPPDAEPAL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02019 667 MobiDBLite consensus disorder prediction 411 437 - -
Vivi5g02019 667 Pfam Condensin complex subunit 2 23 505 IPR022816 GO:0000796|GO:0007076
Vivi5g02019 667 Pfam Condensin complex subunit 2 546 657 IPR022816 GO:0000796|GO:0007076
Vivi5g02019 667 PANTHER CONDENSIN COMPLEX SUBUNIT 2 18 663 IPR022816 GO:0000796|GO:0007076
Vivi5g02019 667 PIRSF Condensin_H 257 541 IPR022816 GO:0000796|GO:0007076
Vivi5g02019 667 PIRSF Condensin_H 513 661 IPR022816 GO:0000796|GO:0007076
Vivi5g02019 667 PIRSF Condensin_H 1 269 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02019 Vivi-Chr5 80662979 80667775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02019 K06676 - gmx:100799781 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02019 5 80662979 80667775 Vivi5g02019 5 80662979 80667775 ECH
Vivi2g06234 2 196939280 196944036 Vivi5g02019 5 80662979 80667775 PCT