Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06234 ATGGCAGAACCATTTAGCCCTAATCCAACTACCGTTTCCAAACGGAGGATTCCCGTTTCCGCTTCCAATTTCTTCGTCGGCTCCAACGACGATCAACGTGAACGCGCTGCCGCCCGTGCTGCTCGTGCCGCCGCCATCCGCCGCACTTCCCGTTCCGTTAACTTCCAATCCTTACCCTCCGATTCTGAACCAGGTCTCGACAGAAACCAGATTCTAGAGTTGTTCCACCGTTGCATTAAGCTTGCTTCAGAAAATAAAATTAATCAGAAAAATACTTGGGAGTTGGATTTGATTGATCATCTTACTGATATTATTAGGGATGAAGATGATAATCACGCACACACTAATTTTCAAATGGCAAGCTGCACTCTTGAAGCGGGAGTCAAGATTTATTCATTAAGAGTGGATTCAGTATATTCGGAGACGTATAAAGTCCTTGCTAGAATGAATAGGGCGGGCCAAGATACTGAGCAAGAGAGTGTCAATGTAGAAGGGGTACAAGAAAATAGCAAGAAGGGAATCGTCAAAAAGTTGTCACCTTTGTCAACATTGGAATCATCTTTTGAGGCTCTTAATGTAAAGAAGTTTGATGTTGCATTTTCTGTGGATCCCCTCTATCGCCAAACATCAGCAAAATTTGATGAAGGGGGAGCCAAAGGTCTTTTGATGAATAACCTAGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACTAGATGTGCCAGGGAAGTATGTAGCTAGTCAAAATGAACATGATAGTTCCAATATAATTGATCTTTCTTTTGCAAGAGATTGTATTGAACAAATGATGTTGGACGTACGTATTAAGGATGAAATTTCTCCAACTCTCAGGCAGATAGTAAATCAATTTGACGAAAATAATAGAAGGCCCTCTGATTTTCAATGTTTTGGCCATAAATCAGCCGAAGAGGTTGATGCAGCTACTGATTATGAGGTTGAGGCTGAAACAGAAGACTATGAGACTTTCCCAACTTGGCCCTATGAGCACAACAACCAAAGCTTTGCTGCTGAAGTGGGCTCTAACGACGCAGAGCCAATGTTTTCAAGTTATCCTCAGGAGAAAGAACCTTTTACTTCCCAAGACCCTGATATGGATGAACTTTTTGAAAATGTTGATGAGTATCTATCTTTTAATCTAGGTTTTAGGTCAAAGAAAAATGCCTGGGCAGGTCCTGATCATTGGAATTACCATAAAGCTAAAGGTTCTGAGTCAGAAGTTCGTTGTTCTCCTGAAGATGGGTCAACTGTCAAAACTAGGCTACCAAAGACTATGAGACAGATCGAAGTTGATTTAGATTTCACAAATTCTCTTGGGAAAACACTTCCAGATATCTTTGCACCTCCCAAGAATCCTAAATCGTTAGTACTCCCTGAAAATAGACCCCATTGTGTTACAAAACTCCCAGAGGACTGCCACTATGAGCCAGAGGATCTTGTTAAGTTATTTCTTTTGCCTAGTGTGAAGTGTCTAGGGAGGAGGAGGGTGAGAAATTTCTCAGATGAATCGACAGAGCAGTGCAATAACAATGAACCATTCCATTCCTGGGATAACGGAAGTGTTTTTGATGGTGAGTATGATGGCGAACATAGTGACGCGGATGACTCTAGCACACTTATTTCTCAGCCCCGTCAGATCAACAAAGTTGAAGTTCAATATGACAAAACTGCCAAACAAGTTGACGTTCAAGCACTGAAATTCACCCTTTGGAACTCTATTCAAGCATCAGTTCAACTTACTTTTCAGGGTGAAAAAGAATCGATATCTTTCAGGGATATATTGGCCAACTTTCCTAGTGAATGCAATGCTGCTGCAAATGTTAGTGACATAACCCCACATTTGTGTTTCATATGCTTATTGCATTTGGCTAATGAGAAAGAGCTGAGCATCCAAAGCTGTCCCGACTTGGATGAGCTTCGTATATATATGCCTTCCTAA 1959 0.415 MAEPFSPNPTTVSKRRIPVSASNFFVGSNDDQRERAAARAARAAAIRRTSRSVNFQSLPSDSEPGLDRNQILELFHRCIKLASENKINQKNTWELDLIDHLTDIIRDEDDNHAHTNFQMASCTLEAGVKIYSLRVDSVYSETYKVLARMNRAGQDTEQESVNVEGVQENSKKGIVKKLSPLSTLESSFEALNVKKFDVAFSVDPLYRQTSAKFDEGGAKGLLMNNLGVYGGCRVLFDSLDVPGKYVASQNEHDSSNIIDLSFARDCIEQMMLDVRIKDEISPTLRQIVNQFDENNRRPSDFQCFGHKSAEEVDAATDYEVEAETEDYETFPTWPYEHNNQSFAAEVGSNDAEPMFSSYPQEKEPFTSQDPDMDELFENVDEYLSFNLGFRSKKNAWAGPDHWNYHKAKGSESEVRCSPEDGSTVKTRLPKTMRQIEVDLDFTNSLGKTLPDIFAPPKNPKSLVLPENRPHCVTKLPEDCHYEPEDLVKLFLLPSVKCLGRRRVRNFSDESTEQCNNNEPFHSWDNGSVFDGEYDGEHSDADDSSTLISQPRQINKVEVQYDKTAKQVDVQALKFTLWNSIQASVQLTFQGEKESISFRDILANFPSECNAAANVSDITPHLCFICLLHLANEKELSIQSCPDLDELRIYMPS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06234 652 PANTHER CONDENSIN COMPLEX SUBUNIT 2 22 650 IPR022816 GO:0000796|GO:0007076
Vivi2g06234 652 PIRSF Condensin_H 534 651 IPR022816 GO:0000796|GO:0007076
Vivi2g06234 652 PIRSF Condensin_H 261 545 IPR022816 GO:0000796|GO:0007076
Vivi2g06234 652 PIRSF Condensin_H 1 266 IPR022816 GO:0000796|GO:0007076
Vivi2g06234 652 Pfam Condensin complex subunit 2 18 542 IPR022816 GO:0000796|GO:0007076
Vivi2g06234 652 Pfam Condensin complex subunit 2 542 648 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06234 Vivi-Chr2 196939280 196944036 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06234 K06676 - gmx:100777082 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06234 2 196939280 196944036 Vivi2g06234 2 196939280 196944036 ECH
Vivi2g06234 2 196939280 196944036 Vivi5g02019 5 80662979 80667775 PCT